Gene TM1040_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1293 
Symbol 
ID4078492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1387732 
End bp1388022 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content61% 
IMG OID638006601 
ProductPAAR 
Protein accessionYP_613288 
Protein GI99081134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.455231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCTG TTACCAGAAA AGGCGACACC TGCACGGGCC ACGGCAACTA TCCTTCCCGC 
TCGAGCACTG GCGGTAGCGG TTCCGTCTAT ACAAACGGCA AGCCTGTCCA CAGACAGGGA
GATGGCTGGT CGGTTCATTG CAATCCAGTA CCGATTTGCC ATGGCGGCAT CCTTGCCACC
GGGTCGAGCA CCGTGTTCGT TGAGGGCAAA CAGATTGGGC GCATCGGTGA TCCCGTCGAT
TGCGGTTCCT CCGTCGCGAG CGGCTCCGGG AACGTGTTCG CGGGTGGATA G
 
Protein sequence
MPAVTRKGDT CTGHGNYPSR SSTGGSGSVY TNGKPVHRQG DGWSVHCNPV PICHGGILAT 
GSSTVFVEGK QIGRIGDPVD CGSSVASGSG NVFAGG