Gene TM1040_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1208 
Symbol 
ID4076343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1297294 
End bp1298055 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content59% 
IMG OID638006515 
Productornithine-acyl[acyl carrier protein] N-acyltransferase 
Protein accessionYP_613203 
Protein GI99081049 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.32888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATG GCGCGCCACA GTTTTCCGTG AGGATGGCAA AGACCGACGA GGACCTACGC 
GCCGCGCAGG CGCTGCGCTA CGAGGTCTTT GTGCGCGAGC TGGGCGGATG CGGGGCTCTG
GTGGATCACG AAGCCGGGCT GGAGCGCGAC CAGTTCGACC CTTATTTCGA TCATATGCTG
GTGAGCGACG ACACCTCGGG CGAGGTGGTT GGCGTCTACC GGTTGCTCCG GGGGGATCAG
GCCGAGCGTT TAGGGCGGTT TTATTCCGAG GATGAATATG ATCTTGCGCC CTTGCGGGCT
TCGGGGCGCA AACTTTTGGA GTTGGGGCGC TCCTGCCTCC ATGCGCAGTA TCGCGGTGGC
ATGGCGATGT TTCACCTCTG GAACGGGCTT GCGGCTTATG TGGCCGAACA TGAAATCGAA
GTGCTCTTTG GGGTGGCGTC CTTTCATGGC ACCGATGCCA TGGATCTGGC GCAACCTCTG
TCCATGCTGC ATGCCAATCA TCTCGCGCCT GAAGAATTAC GCGTTCGTTC AAAGGCTTAT
CAGCCAATGA ATGTATTGCC CGAAGATCAG ATCGACCGCC GCAAGGCGAT GCTGGAGACG
CCTGCGCTCA TCAAGGCGTA TCTGCGGCTC GGCGGGTTTG TTGGCGACGG CGCTTATGTG
GATCATGATT TCAACACCAC GGATGTCTGT CTGATCCTCG ACACCGCGCG CATGAACGCG
CGCCAGAAGA GCATCTATAC CCGCGGAACC GCCTCTGCAT GA
 
Protein sequence
MHDGAPQFSV RMAKTDEDLR AAQALRYEVF VRELGGCGAL VDHEAGLERD QFDPYFDHML 
VSDDTSGEVV GVYRLLRGDQ AERLGRFYSE DEYDLAPLRA SGRKLLELGR SCLHAQYRGG
MAMFHLWNGL AAYVAEHEIE VLFGVASFHG TDAMDLAQPL SMLHANHLAP EELRVRSKAY
QPMNVLPEDQ IDRRKAMLET PALIKAYLRL GGFVGDGAYV DHDFNTTDVC LILDTARMNA
RQKSIYTRGT ASA