| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1201 |
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| Symbol | rpmA |
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| ID | 4076336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1291592 |
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| End bp | 1291861 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006508 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_613196 |
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| Protein GI | 99081042 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.862516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCTGG CGGTTCGTCC CGTAACGGTC GCGACTCCGC AGGTCGCCGT
CTTGGCGTGA AACTTTATGG TGGTCAGTCT GCAATCGCGG GCAACATCAT CGTGCGTCAG
CGCGGCACCA AGTTCTGGCC GGGCGAAGGC GTTGGTATTG GCAAAGATCA CACCATCTTT
GCGACCGCCA ACGGCAACGT GACCTTCCAC AAGGGCCTCA AAGGCCGCAC CTTTATTTCG
GTTCTCCCGG CGGCGGAGGC CGCTGAGTAA
|
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| Protein sequence | MAHKKAGGSS RNGRDSAGRR LGVKLYGGQS AIAGNIIVRQ RGTKFWPGEG VGIGKDHTIF
ATANGNVTFH KGLKGRTFIS VLPAAEAAE
|
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