| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1188 |
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| Symbol | |
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| ID | 4077797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1277641 |
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| End bp | 1279176 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006494 |
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| Product | ABC transporter related |
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| Protein accession | YP_613183 |
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| Protein GI | 99081029 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.909394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCG ACGTGATCCT GCAAATTTCG AACCTCACGA AGTCCTTTGG GCCGGTAAAG
GCGCTAAAGG GCGTGGATTT CGAACTCCGC CGTGGCGAGA TCCACGCAAT CGCCGGAGAG
AACGGCGCCG GGAAGTCCAC GTTGATGAAC ATCATCGACG GTATTTTGCA GCCCGACAGC
GGTGAAATCC GGCTCGATGG CACCCCTGTC GAAATTCCGT CTCCGGCAGC GGCGCAAAAG
ATGGGGATCG GCTTTGTGCA TCAGGAGATC GCACTCTGTC CGGATGTCTC GGTCGCTGAA
AACATCTTTA TGGCTGCGAC CAATTCAAGC CGGTCTTTTC TGATGGATTA CAAAGGGATC
GAAGCCAAAG CGCGCGAAGT TTTTGCGCAG TTGTCGAGCA TTGATCCCTC TGTGCTCGTC
CGGGACCTTT CGATTTCGAA CCAGCAGCTT GTGGAGATCG CCAAGGCGCT GACGCTGGAC
TGCCGGGTGT TGATCCTGGA TGAGCCAACG GCAGCGCTGA CCGAGGCGGA GGCGCAGGTG
CTGTTCAAGA TCATGCGGCG GCTGGCGGAT CAGGGGATTT CGTTGATTTA TATCTCGCAT
CGTATGGTCG AGATCTTTGA CAATTGCGAC CGGGTCTCGG TGTTTCGCGA TGGCCGCTAT
GTGACGACAC AGGATGTCGC CAAAATCACG CCTGCAGATG TGGTCCGGGC CATGGTGGGG
CGCGAAATTG GCGATCTCTA TCCCGAAAAA CAACGTCCCG AGGCCTGCAG CACGACCGAG
GTCCTCCGGG TTGAAAACCT TTGTGAGGCC GAGCGGTTTC ACGATGTGTC CTTTTCGCTG
CATAAGGGCG AGATCCTGGG CTTTGCCGGG TTGATCGGTG CAGGGCGCAG CGAGATCGCC
AAAGGGGTCT GCGCGCTTGA AGGTCAGGTG ACTGGCAGGC TCTGGCTCAA TGGAGAGCCG
CTGGCGCTGC GCGACTATCA GGACAGCATT GATGCGGGGA TTGTGTATCT CTCCGAGGAT
CGCAAAGGCG ACGGCGTGTT TCTGGATATG TCCATCGCCA GCAATGTTTC GGCGCTGAAG
GTCGAACAGG TGGCCAGCGC CCTCGGGTTG ATCCAGCCTG GCAGGGAAAT AGAGCAGGCG
GACCGACTTG GGCGCAAGCT CAACCTCAAA TGCGGCACGC TGCAGGATCC GGTTTCGTCG
CTTTCGGGCG GCAATCAACA AAAGGTAGCA CTGGCCAAGA TGCTCTCGGT CAACCCGCGA
CTGATCTTTC TGGATGAGCC GACGCGTGGC GTTGACGTTG GCGCAAAGGC CGAAATCTAC
CGCATCCTGC GGGATTTGGC CGAGGAGGGC GCAGGCATTG TGGTTATTTC ATCCGAGCTG
CCAGAACTGA TCGGTCTGTG TGATCGCGTG CTGGTGATCC ACGAAGGGTG TCTGAGCGGT
GAAGTGAGTG GCCCGGACAT GACAGAAGAA AACATCATGC ACCTTGCCTC GGGCACTCAG
CAAGGCACGG GTGCAGCGTC GGTTGCGGCG CAATGA
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| Protein sequence | MTGDVILQIS NLTKSFGPVK ALKGVDFELR RGEIHAIAGE NGAGKSTLMN IIDGILQPDS
GEIRLDGTPV EIPSPAAAQK MGIGFVHQEI ALCPDVSVAE NIFMAATNSS RSFLMDYKGI
EAKAREVFAQ LSSIDPSVLV RDLSISNQQL VEIAKALTLD CRVLILDEPT AALTEAEAQV
LFKIMRRLAD QGISLIYISH RMVEIFDNCD RVSVFRDGRY VTTQDVAKIT PADVVRAMVG
REIGDLYPEK QRPEACSTTE VLRVENLCEA ERFHDVSFSL HKGEILGFAG LIGAGRSEIA
KGVCALEGQV TGRLWLNGEP LALRDYQDSI DAGIVYLSED RKGDGVFLDM SIASNVSALK
VEQVASALGL IQPGREIEQA DRLGRKLNLK CGTLQDPVSS LSGGNQQKVA LAKMLSVNPR
LIFLDEPTRG VDVGAKAEIY RILRDLAEEG AGIVVISSEL PELIGLCDRV LVIHEGCLSG
EVSGPDMTEE NIMHLASGTQ QGTGAASVAA Q
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