Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1170 |
Symbol | |
ID | 4075956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1259585 |
End bp | 1261216 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006476 |
Product | acyl-CoA synthetase |
Protein accession | YP_613165 |
Protein GI | 99081011 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0279011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA ACCCCTACAA TACCGATCTG GATCGCACCC CGGCCAACTA TCAGCCCCTG ACCCCGCTCA TGTTTCTGGA GCGGGCCGCA ACGGTATTTC CAGAGCACAC GGCAATCATT CACGGCCCCC TTCGACGCAG CTACGCCGCT TTTTATGCAC GCGCGCGCCA GCTTGGCTCG GCACTGTCGC ATAGGGGCAT CACGCGGGGC GATACGGTCT CGGCCCTGCT GCCAAACACG TCCGCGATGC TTGAGTGTCA CTATGGCGTC CCCATGTGCG GTGCGGTGCT GCATTCGATC AACACCCGGC TTGATGCTGC GATCATCGCC TTTCAGCTGG ATCACGCGAT GTCCAAGGTC GTCATCGTCG ACTCTGAATT CATGCCCTTG ATGCAGGAGG CGCTGGCGCT TTGCTCGGTG CAGCCCCTGC TGATCGAGGT CGACGATCCC GTCTACGAGG GCGCGCGGAT CAAAACCGAA GCCGTGGACT ACGATAGCTT TATTGCGGAT GGTGACGCCG AGTTTGCCTG GCTCATGCCC GAAGACGAAT GGGACGCGAT CTCGATCAAC TACACCTCGG GCACCACCGG AGACCCCAAG GGGGTCGTTT CGCATCATCG CGGGGCCTAT CTTTTGGCGC AGGGCAATGC GCTCACGACA ACGATGGGCA AACATGCGGT CTATCTCTGG ACCCTGCCGA TGTTTCACTG CAACGGCTGG TGTTTTCCCT GGACGCTCTC GGCGATCATT GGCACCCATG TCTGCCTGCG CCAGGTGCGG GCGGATCAGA TCTGGAACGC GCTCGCCGAC GAGGGCGTCA CGCATCTCTG TGGCGCGCCC ATCGTGATGT CGCTGATGAT CTCGGCCCCC GCCGACGTGC AGCGCCCCCT CGATCAGACC GTTCAGTTTT TTACAGCCGC TGCCCCGCCG CCGGAAAAGC TGCTGGCGGA CATGAAAACC GCAGGCTTTG AAGTCACGCA TCTTTATGGA CTCACAGAAA CCTATGGCCC TGCCGTGGTC AACGACTGGC ATCAAAGCTG GTCCGAGCTG CCGCACGACG AACAGTCCCG CCTGAAATCC CGGCAGGGCG TGCGCTATCT TCCGCTCGAG GGACTCAACG TTCTGGACCC CGAAACCCTA GAGCCCGTGC CCCATGATGG CGAAACCATG GGCGAGGTCA TGTTTCGCGG CAATGTCGTG ATGAAGGGCT ATTTTCGCAA TCCTGACGCC ACCCGAAAAG CCTTTGAGGG GGGCTGGTTT CATTCCGGCG ATCTGGGTGT TGTTCATCCT GACGGCTATA TCCAGCTCAA GGACCGCTCG AAGGATGTCA TTATTTCCGG CGGAGAGAAT ATCTCCTCCA TCGAGGTCGA AGAGGCGCTG TATCGCCATC CCGCGATTGC CGTCACCGCC GTTGTCGCCA TGCCCGACGA GAAATGGGGC GAAACACCAT GCGCCTTCAT CGAGCTGGCC GAAGGTGCAG AGATCGACAC CGATGCGCTC AGGCAATGGT GTCGTGACCA ACTCGCCCCC TACAAGGTGC CGCGCAAATT TGTCCTGACC GAAATCCCGC GCACCTCAAC CGGGAAAATC CAGAAATTCG CCCTGCGGGA ACAGGCGAAG TCGCTCTGCT GA
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Protein sequence | MSANPYNTDL DRTPANYQPL TPLMFLERAA TVFPEHTAII HGPLRRSYAA FYARARQLGS ALSHRGITRG DTVSALLPNT SAMLECHYGV PMCGAVLHSI NTRLDAAIIA FQLDHAMSKV VIVDSEFMPL MQEALALCSV QPLLIEVDDP VYEGARIKTE AVDYDSFIAD GDAEFAWLMP EDEWDAISIN YTSGTTGDPK GVVSHHRGAY LLAQGNALTT TMGKHAVYLW TLPMFHCNGW CFPWTLSAII GTHVCLRQVR ADQIWNALAD EGVTHLCGAP IVMSLMISAP ADVQRPLDQT VQFFTAAAPP PEKLLADMKT AGFEVTHLYG LTETYGPAVV NDWHQSWSEL PHDEQSRLKS RQGVRYLPLE GLNVLDPETL EPVPHDGETM GEVMFRGNVV MKGYFRNPDA TRKAFEGGWF HSGDLGVVHP DGYIQLKDRS KDVIISGGEN ISSIEVEEAL YRHPAIAVTA VVAMPDEKWG ETPCAFIELA EGAEIDTDAL RQWCRDQLAP YKVPRKFVLT EIPRTSTGKI QKFALREQAK SLC
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