| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1145 |
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| Symbol | |
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| ID | 4078441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1232945 |
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| End bp | 1234120 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006449 |
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| Product | hypothetical protein |
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| Protein accession | YP_613140 |
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| Protein GI | 99080986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0013509 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0789492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTTT CCCGCACCAA CGCCACTTTT GTTTCGCCAA TCGTGCAATC CCGGCGCTGG
CTGGAAGATG TGACCTTTTC CGACGATCTG CCGCTCCTCA ATCTCAGTCA GGCCGCCCCG
GCCGATCCAC CACCAGAAGG GCTGCGTCAG GCGATGGCCG ACGCCCTGTT GTCAGAGACC
AGCGCCCATC TCTACGGACC GGTGCTTGGC AATGCGGATC TGCGCAAAGC TCTCGCCGCC
CAAATCACGC GCCACTACGA GGCGGACATC ACACCGTCCG AGGTCGCGAT CACCTCGGGC
TGCAATCAGG CCTTTGCCGC CACCATCCAG AGCCTCTGCG CCGAAGGTGA CGAGGTCATC
CTGCCGACGC CATGGTACTT TAACCACAAG ATGTGGCTCG ACATGCAGGG GGTCACCACC
CTGCCCTTGC CTGTGGGCGA CGGAATGTTG CCAGAAGTCG CCAAGGCCGA AGCGCTGATC
ACGCCGCGCA CTCGCGCAAT CGTCCTGGTC ACACCCAACA ATCCCTGCGG CGTTGAATAT
CCCGCGGCCT TGATGGACGC GTTCTTTGAG CTGGCACAGC GTCATGGGCT CACGCTGATT
GTGGACGAGA CCTATCGCGA TTTCGACAGC CGCGATGGCG CGCCCCACGG GCTGTTTTCG
CGCAAGGACT GGCATGAAAC CCTGATACAT CTCTATTCCT TCTCCAAAGC CTATCGGCTG
ACCGGCCATC GCGTGGGCGC GATCGTGGCT GCGCCCGAGC GCCTGCTCGA GATGGAGAAA
TTCCTCGATA CCGTCACCAT CTGTCCCGCG CAGATCGGCC AGATCGGCGC CAAATGGGGG
ATCGAGAACC TCGATGACTG GCTCGCTGGC GAGCGCGGCG AGATCCTCGC GCGGCGCGAC
GCCATTGCCG CCGGATTTGC TCCGCTGGCG GCAAAAGGCT GGCAGCTTTT GGGACTGGGG
GCCTATTTCG CCTATGTGGC GCATCCGTTC GCGGCAAGCT CCGACGAGAT AGCACAACGC
CTGCTTCACT CGGCTGGCAT GCTGCTTTTG CCGGGCACGA TGTTCACACC GGCTGGCGCC
CCCGAGGGCC ACCGCCAGTT CCGCATTGCC TTTGCCAATG TCGATCAGAC CGGCATTGCG
GAGATGCTCG CGCGACTGGC GCAGTTTGAC GGTTGA
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| Protein sequence | MHLSRTNATF VSPIVQSRRW LEDVTFSDDL PLLNLSQAAP ADPPPEGLRQ AMADALLSET
SAHLYGPVLG NADLRKALAA QITRHYEADI TPSEVAITSG CNQAFAATIQ SLCAEGDEVI
LPTPWYFNHK MWLDMQGVTT LPLPVGDGML PEVAKAEALI TPRTRAIVLV TPNNPCGVEY
PAALMDAFFE LAQRHGLTLI VDETYRDFDS RDGAPHGLFS RKDWHETLIH LYSFSKAYRL
TGHRVGAIVA APERLLEMEK FLDTVTICPA QIGQIGAKWG IENLDDWLAG ERGEILARRD
AIAAGFAPLA AKGWQLLGLG AYFAYVAHPF AASSDEIAQR LLHSAGMLLL PGTMFTPAGA
PEGHRQFRIA FANVDQTGIA EMLARLAQFD G
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