Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1132 |
Symbol | |
ID | 4077253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1216941 |
End bp | 1218236 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638006436 |
Product | citrate synthase |
Protein accession | YP_613127 |
Protein GI | 99080973 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CACAGAAAAC AGCCCAGCTC AGCTTGAATG GTGAGACCTA CGAACTCCCC ATCTTCTCGC CGACTGCCGG GCCCGATGTT CTGGATATCC GCAAGCTCTA CGCGCAGTCC GGAGTGTTCA CCTATGATCC GGGCTTCACC TCCACTGCGA GCTGTGACAG CACGATCACC TATATCGACG GCAACGAAGG TGTGCTGCTG CATCGTGGCT ATCCGATCGA CCAGCTGGCC GGTAAATCCC ACTACCTCGA AGTCTGCTAC CTGCTCCTTT ATGGTGAGCT GCCGACCGCG ACGCAGCTTG AGGATTTCGA GACCCGTGTG ACCCGCCACA CCATGGTCCA CGAGCAGATG CACAACTTCT TCCGTGGTTT CCGCCGGGAC GCGCACCCGA TGGCAACCTT GGTGGGCGTT GTGGGCGCAA TGTCGGCCTT CTATCACGAC TCCACCGACA TCTCCGATCC GTGGCAGCGT GAAGTGGCTG CAATCCGCCT GATTGCAAAA CTGCCGACGA TTGCTGCGAT GGCCTACAAG TATTCCATCG GCCAGCCGTT TGTGTATCCG CGCAACGATC TGGATTACGC CGCGAACTTC CTGCACATGT GTTTCTCTGT CCCGGCCGAG AACTACACCG TGGACCCGAT CCTGAGCCGC GCGATGGACC GGATCTTCAC CCTGCATGCG GACCACGAGC AGAACGCCTC GACCTCGACC GTGCGTCTGG CGTCCTCCTC CGGGGCCAAC CCCTTTGCCT GTATCGCAGC TGGCATTGCC TGCCTCTGGG GCCCTGCCCA CGGTGGCGCC AACCAGGCCT GCCTCGAGAT GCTCAAGGAA ATCGGCTCTG TCGATCGCAT TCCGGAGTTC ATCGCACGCG CCAAAGACAA GAACGATCCG TTCCGTCTGA TGGGCTTTGG CCACCGCGTC TACAAGAACA CGGACCCGCG CGCCAAGGTG CTGAAGCAGT CTGCAGACGA AGTGCTGGAG CTTCTGGGCG TGGAAGACAA CCCGCTCCTG CAGGTCGCCA AGGAACTCGA GCAGACCGCG CTCAACGATC CGTATTTCAT CGAGAAAAAG CTGTTCCCGA ACGTGGACTT CTACTCGGGC ATCATCCTCG AGGCGATGGG CTTCCCGACC TCCATGTTCA CCCCGATCTT TGCGCTGTCG CGCACCGTCG GCTGGATCTC CCAGTGGAAA GAAATGATCG GTGATCCGCA GAACAAAATC GGCCGTCCGC GCCAATTGTA TCTCGGTGAG ACACAGCGCG ACTATGTCGA CATCGAAAAC CGCTAA
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Protein sequence | MTDTQKTAQL SLNGETYELP IFSPTAGPDV LDIRKLYAQS GVFTYDPGFT STASCDSTIT YIDGNEGVLL HRGYPIDQLA GKSHYLEVCY LLLYGELPTA TQLEDFETRV TRHTMVHEQM HNFFRGFRRD AHPMATLVGV VGAMSAFYHD STDISDPWQR EVAAIRLIAK LPTIAAMAYK YSIGQPFVYP RNDLDYAANF LHMCFSVPAE NYTVDPILSR AMDRIFTLHA DHEQNASTST VRLASSSGAN PFACIAAGIA CLWGPAHGGA NQACLEMLKE IGSVDRIPEF IARAKDKNDP FRLMGFGHRV YKNTDPRAKV LKQSADEVLE LLGVEDNPLL QVAKELEQTA LNDPYFIEKK LFPNVDFYSG IILEAMGFPT SMFTPIFALS RTVGWISQWK EMIGDPQNKI GRPRQLYLGE TQRDYVDIEN R
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