Gene TM1040_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1132 
Symbol 
ID4077253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1216941 
End bp1218236 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content59% 
IMG OID638006436 
Productcitrate synthase 
Protein accessionYP_613127 
Protein GI99080973 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CACAGAAAAC AGCCCAGCTC AGCTTGAATG GTGAGACCTA CGAACTCCCC 
ATCTTCTCGC CGACTGCCGG GCCCGATGTT CTGGATATCC GCAAGCTCTA CGCGCAGTCC
GGAGTGTTCA CCTATGATCC GGGCTTCACC TCCACTGCGA GCTGTGACAG CACGATCACC
TATATCGACG GCAACGAAGG TGTGCTGCTG CATCGTGGCT ATCCGATCGA CCAGCTGGCC
GGTAAATCCC ACTACCTCGA AGTCTGCTAC CTGCTCCTTT ATGGTGAGCT GCCGACCGCG
ACGCAGCTTG AGGATTTCGA GACCCGTGTG ACCCGCCACA CCATGGTCCA CGAGCAGATG
CACAACTTCT TCCGTGGTTT CCGCCGGGAC GCGCACCCGA TGGCAACCTT GGTGGGCGTT
GTGGGCGCAA TGTCGGCCTT CTATCACGAC TCCACCGACA TCTCCGATCC GTGGCAGCGT
GAAGTGGCTG CAATCCGCCT GATTGCAAAA CTGCCGACGA TTGCTGCGAT GGCCTACAAG
TATTCCATCG GCCAGCCGTT TGTGTATCCG CGCAACGATC TGGATTACGC CGCGAACTTC
CTGCACATGT GTTTCTCTGT CCCGGCCGAG AACTACACCG TGGACCCGAT CCTGAGCCGC
GCGATGGACC GGATCTTCAC CCTGCATGCG GACCACGAGC AGAACGCCTC GACCTCGACC
GTGCGTCTGG CGTCCTCCTC CGGGGCCAAC CCCTTTGCCT GTATCGCAGC TGGCATTGCC
TGCCTCTGGG GCCCTGCCCA CGGTGGCGCC AACCAGGCCT GCCTCGAGAT GCTCAAGGAA
ATCGGCTCTG TCGATCGCAT TCCGGAGTTC ATCGCACGCG CCAAAGACAA GAACGATCCG
TTCCGTCTGA TGGGCTTTGG CCACCGCGTC TACAAGAACA CGGACCCGCG CGCCAAGGTG
CTGAAGCAGT CTGCAGACGA AGTGCTGGAG CTTCTGGGCG TGGAAGACAA CCCGCTCCTG
CAGGTCGCCA AGGAACTCGA GCAGACCGCG CTCAACGATC CGTATTTCAT CGAGAAAAAG
CTGTTCCCGA ACGTGGACTT CTACTCGGGC ATCATCCTCG AGGCGATGGG CTTCCCGACC
TCCATGTTCA CCCCGATCTT TGCGCTGTCG CGCACCGTCG GCTGGATCTC CCAGTGGAAA
GAAATGATCG GTGATCCGCA GAACAAAATC GGCCGTCCGC GCCAATTGTA TCTCGGTGAG
ACACAGCGCG ACTATGTCGA CATCGAAAAC CGCTAA
 
Protein sequence
MTDTQKTAQL SLNGETYELP IFSPTAGPDV LDIRKLYAQS GVFTYDPGFT STASCDSTIT 
YIDGNEGVLL HRGYPIDQLA GKSHYLEVCY LLLYGELPTA TQLEDFETRV TRHTMVHEQM
HNFFRGFRRD AHPMATLVGV VGAMSAFYHD STDISDPWQR EVAAIRLIAK LPTIAAMAYK
YSIGQPFVYP RNDLDYAANF LHMCFSVPAE NYTVDPILSR AMDRIFTLHA DHEQNASTST
VRLASSSGAN PFACIAAGIA CLWGPAHGGA NQACLEMLKE IGSVDRIPEF IARAKDKNDP
FRLMGFGHRV YKNTDPRAKV LKQSADEVLE LLGVEDNPLL QVAKELEQTA LNDPYFIEKK
LFPNVDFYSG IILEAMGFPT SMFTPIFALS RTVGWISQWK EMIGDPQNKI GRPRQLYLGE
TQRDYVDIEN R