Gene TM1040_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1117 
Symbol 
ID4077238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1199086 
End bp1199322 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content63% 
IMG OID638006421 
ProductBolA-like protein 
Protein accessionYP_613112 
Protein GI99080958 
COG category[T] Signal transduction mechanisms 
COG ID[COG0271] Stress-induced morphogen (activity unknown) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATGC AGGCCCATGA AATCGAAGCC CTCCTGCGCG AGACCTTCCC GGATGCGCAA 
ATTCAGGTGG GCGGCAGCGA TGGCGTTCAC ATGTCCGCCA TGGTCATCGA CGAGAGCTTT
CGCGGCAAAA ACCGCGTGCA GCAGCAACGC GCCGTCTATG CCGCGCTCAA GGGCAAGATG
GATGGCCCCA GCGGTGAGCT GCACGCCCTC GCCCTGACCA CCAAAGCGCC GGAGTAG
 
Protein sequence
MPMQAHEIEA LLRETFPDAQ IQVGGSDGVH MSAMVIDESF RGKNRVQQQR AVYAALKGKM 
DGPSGELHAL ALTTKAPE