Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1044 |
Symbol | rpsR |
ID | 4078102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1124232 |
End bp | 1124459 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638006348 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_613039 |
Protein GI | 99080885 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.143453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCA AACCATTTTT CCGTCGCCGG AAAGTGTGCC CGTTCTCTGG TGAGAACGCA CCCAAAATCG ACTACAAAGA CACGCGTCTC CTGCAGCGCT ACATCTCTGA GCGTGGCAAG ATCGTGCCGT CCCGTATCAC CGCCGTTTCG GCAAAGAAGC AGCGTGAACT GGCCCGTGCC ATCAAACGCG CCCGCTTCCT CGCCCTGCTG CCCTATGCCG TGAAGTAA
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Protein sequence | MAAKPFFRRR KVCPFSGENA PKIDYKDTRL LQRYISERGK IVPSRITAVS AKKQRELARA IKRARFLALL PYAVK
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