Gene TM1040_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1040 
Symbol 
ID4078098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1121099 
End bp1121977 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content60% 
IMG OID638006344 
Productflagellin-like 
Protein accessionYP_613035 
Protein GI99080881 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0599642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCG CGATGGAACC TTCTCAAATG TCCAGTATAT TGACCAATTA CGGGGCGATG 
ACGGCCCTGC GCACTCTCAA GGCCATTAAC GGCAACCTGA ACGACGTGCA GACCTCGATC
TCCACCGGCA AGCGGATCGG TGCGGCCAAA GACAATTCTG CGGTCTGGGC CATCTCCAAG
ACGATGGAGG CCGACATCTC CGGCTTCCGC TCAATCAAGA GCAGCCTCGC GTTGGGCGAG
GCAACCGTGG CCGTGGCCTC TGCCGGAGCG GAGCAGATTG TTGAAAAACT TACGGAAATC
AAAGAGCTGA TTGTTTCGGC GCAGTCCGAG AACGTCGATC ATGATACCAT TCAGACCGAC
ATCACCTCCA AGGTGGACCA GATCGAGGCG ATCATCTCTG CCGCGCAGTT CAACGGTGCA
AATCTGCTCT CGACCGATGT GGATGGCAAT GGCGCCACCT CACTTGGGGT CCTGGCTTCG
CTGGATCGCA GCGGCGCTGG CGGCACCGTC ACGTCGAGCG AGATCTCCGT GGCTTCGGTG
AATTTCGACT CCTCTCTGGA TCTGGCCAGC AACCTCACGG CGATCACGGA TTCCACAACC
GCGGCCACGG CGCTGACCGA GATCGAGGAT TTCTTGCAGG TGGCGATCAA CGGCGCGGCA
TCGCTGGGCT CATCGGCCTC GCGGATCGAG GATCAATCGG ATTTTGTGGG GCGTCTGGTG
GACGCCATGG AGCAAGGTGT CTCCGCCATG ACCGACACGG ATATGGAAGA GGCCTCGGCG
CGTCTCTCGG CGCTGAAGAC CCAGCAGGAA CTGGCGATCC AGTCGCTCAC CATTGCCAAT
CAATCCCCAA GGCTGCTGCT CGAGCTGTTC CGCCGCTAG
 
Protein sequence
MSLAMEPSQM SSILTNYGAM TALRTLKAIN GNLNDVQTSI STGKRIGAAK DNSAVWAISK 
TMEADISGFR SIKSSLALGE ATVAVASAGA EQIVEKLTEI KELIVSAQSE NVDHDTIQTD
ITSKVDQIEA IISAAQFNGA NLLSTDVDGN GATSLGVLAS LDRSGAGGTV TSSEISVASV
NFDSSLDLAS NLTAITDSTT AATALTEIED FLQVAINGAA SLGSSASRIE DQSDFVGRLV
DAMEQGVSAM TDTDMEEASA RLSALKTQQE LAIQSLTIAN QSPRLLLELF RR