Gene TM1040_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0995 
Symbol 
ID4078157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1067792 
End bp1068076 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content58% 
IMG OID638006299 
Productprotein translocase subunit yajC 
Protein accessionYP_612990 
Protein GI99080836 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGTG GCGCAATCGC CCAGTTTATC CCGCTGATCC TGATCTTTGC GATCATGTAC 
TTCCTGCTCA TTCGTCCGCA GCAGAAGAAA ATGAAGCAGC ATCAGAACAT GGTCGAGGCC
CTGCGCCGTG GCGACCAGGT TGTCACCCAG GGTGGCGTGA TCGGCAAGGT CTCCAAGGTC
AAGGAAGACG GCGAGCTTGA GATCGAGATC GCAGAGGGCG TGAAGGTGCG CGTGGTGAAA
TCCACCATCG CTCAGGTGCT GAACAAGACC GAGCCCGCAT CCTGA
 
Protein sequence
MEGGAIAQFI PLILIFAIMY FLLIRPQQKK MKQHQNMVEA LRRGDQVVTQ GGVIGKVSKV 
KEDGELEIEI AEGVKVRVVK STIAQVLNKT EPAS