Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0992 |
Symbol | |
ID | 4078154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1064391 |
End bp | 1065344 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638006296 |
Product | fatty acid desaturase |
Protein accession | YP_612987 |
Protein GI | 99080833 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGA GAGCCTACAC ACGCCAGTAC ACCAAAAAGG ACAACCGGCT CGCCGCGTTG AACTACTTTG GAACCTTCGT TGTCTATTTT ACGAGCCTCT ATCTGGCGAT TACCTATTCA AATCTATGGT TTGTGATGTG GCCTGCGGGC ATTGTTTTTG CCTTCAGCGC CGTGCGGCTT TATGTGCTGC AGCACGACAC CGGGCATCAT TCTCTCTTTG AAACCCGGGC ACAGAACGAA TTCGCGGGGC ATGTGCTCTC GCCTTTCACC TTCGCTCCCT TTGAGGTGAT GAAGCAAAAT CACAACCTGC ATCACGCCAA TGTGGGCAAT CTCGAACACC GCGAAACCGG CGAGATCCAT ACGATGACGG TCGAGGAGTG GAACCGGGCG GGGTTCTTGG AGCGGGTGCT CTACCGGCTC TATCGCAATC CATTTGTGCT GGTGCCCCTC GGTGCGGCGT TCACCTATTT TGTTCGCTAC CGCTGGCCCA AAAACACGGT TGAATTCGGC GTTTTTCCGG TGCTCCTGCA CAACATCGCC ATCATCGCTC TGCTCTATGG GCTCTATCTG CTGGCCGGGG CAGAGGGGCT TTGGATCTGG CTTGGGTTCT CTTTTCTGGG TGGTATGATC GGGGTGTTCC TCGTCTATTT GCAGCATAAT TTCGAGGATA CCTATTGGGA CCGGCGTCCC GATCTCGATC CGCGCGATGC GGCCTTGCAG GGATCGTCCT GCCTGGATTT CGGGTGGTTT TTCGATTTTG CCGTGGCCAA TATCACCCTG CACGACATCC ACCATTATAA CGCGCGCATC CCGTGTTATC GGCTGCGCCA GTGCCATCAC AATATGCCCG AACATATGTC GCTGCGTCGG ATCAAGTTTC GCGAGGCGAT CCGCGCGCTT GGTCTGAAGC TCTGGGATGA GAAGCAAAAA CGTCTGGTAC CTTTCCCGAG CTGA
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Protein sequence | MDLRAYTRQY TKKDNRLAAL NYFGTFVVYF TSLYLAITYS NLWFVMWPAG IVFAFSAVRL YVLQHDTGHH SLFETRAQNE FAGHVLSPFT FAPFEVMKQN HNLHHANVGN LEHRETGEIH TMTVEEWNRA GFLERVLYRL YRNPFVLVPL GAAFTYFVRY RWPKNTVEFG VFPVLLHNIA IIALLYGLYL LAGAEGLWIW LGFSFLGGMI GVFLVYLQHN FEDTYWDRRP DLDPRDAALQ GSSCLDFGWF FDFAVANITL HDIHHYNARI PCYRLRQCHH NMPEHMSLRR IKFREAIRAL GLKLWDEKQK RLVPFPS
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