Gene TM1040_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0982 
Symbol 
ID4078144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1050017 
End bp1050601 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content59% 
IMG OID638006285 
ProductTetR family transcriptional regulator 
Protein accessionYP_612977 
Protein GI99080823 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA GCAGCCCCCA ACAGAGAAAC GCAGAATCAA CACGAAAGCG CATTCTTGCG 
GCGGCGCAGC GGCGTTTTTC CAAACAGAGT TTTGATGCCA CAGGGATGCG CGAAATCGCG
GCAGAGGCAG GCGTCAACGT GGCGCTGGTG AACCGGTACT TCGGCTCCAA AGAGCAGTTG
TTCGAGGAGG CGGTTGTAGA GGCGATTACC ATTGACGCCT TGCTGGCGGG CCCGCAGGAC
GGCTTTGGCA GGCGAACGGC ATCCGCCATG CTTTCAAAAG ATTTCAAATA TATAGACCTT
GACCCCACTG CAGCATTTGT AAACTCTCTG GGCAGCCCGG TTGTCGGCGA GCGTCTACGA
CGCGCCGTAG AAGAACGGCT CTTGCCTGAA ATCTCCGGCT GGCTTGGAGG GGCACATGCG
GATCAACGCG CTGCAATGAT CTTCAGCGCC CTTTTGGGGT TTGATGTGCT GCGCCGCATG
GCCAGGATCG ATGCCCTCAA TACGCGCCAT GGCCCCGTGC TCGAGGATCT CTGCGCCGCG
ACCCTGCAGA GTTACGTGGA TGGCGCCCCG GACACAGAGG ATTAG
 
Protein sequence
MSESSPQQRN AESTRKRILA AAQRRFSKQS FDATGMREIA AEAGVNVALV NRYFGSKEQL 
FEEAVVEAIT IDALLAGPQD GFGRRTASAM LSKDFKYIDL DPTAAFVNSL GSPVVGERLR
RAVEERLLPE ISGWLGGAHA DQRAAMIFSA LLGFDVLRRM ARIDALNTRH GPVLEDLCAA
TLQSYVDGAP DTED