| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0978 |
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| Symbol | |
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| ID | 4078140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1044530 |
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| End bp | 1045072 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006281 |
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| Product | hypothetical protein |
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| Protein accession | YP_612973 |
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| Protein GI | 99080819 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.327238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCA CATCCGTCTG CGTCTATTGC GGCTCTCGCA TGGGAGCAAA GCCCGCCTAT
GAGGCCGCCG CCCGCGATTT TGGCACGGGT CTTGCCGAGG CCGGCTTGCG ACTGGTTTAC
GGCGCCGGTG ATGTCGGCCT CATGGGGACG GTGGCCCGCG CGGCGCAGGC CGCCGGCGGC
GAGACCTTTG GCGTGATCCC CGAACATCTG GTCAAACAGG AAGTCGGCAA GCGCGATCTC
ACCACCTATG TGGTTACCGA GACCATGCAC GAGCGTAAAA AAGTGATGCT TTACAATGCC
GACGCCGTGG TGCTGCTGCC CGGTGGCATG GGCTCACTCG ACGAGCTTTT TGAGGCGATC
ACCTGGCGTC AGCTTGGCCT TCACAACAAG CCCATCGTGG TGCTCAATAC CGAAGGCTAT
TGGGAGCCAC TGCGCGCGCT CATCACCCAT GTGGTCGAGG AGGGCTTTGC CGATGCGGCA
CATGCCGCAC ATCTGCAATG GGTCGACACG CCCGAGGCCG CGCTGGCCAG CCTGCAGAGC
TGA
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| Protein sequence | MAVTSVCVYC GSRMGAKPAY EAAARDFGTG LAEAGLRLVY GAGDVGLMGT VARAAQAAGG
ETFGVIPEHL VKQEVGKRDL TTYVVTETMH ERKKVMLYNA DAVVLLPGGM GSLDELFEAI
TWRQLGLHNK PIVVLNTEGY WEPLRALITH VVEEGFADAA HAAHLQWVDT PEAALASLQS
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