| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0954 |
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| Symbol | |
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| ID | 4077348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1017923 |
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| End bp | 1019824 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006257 |
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| Product | ABC transporter related |
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| Protein accession | YP_612949 |
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| Protein GI | 99080795 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTCG ACATGAGAGA CGCCATGCTC AGGATCGAAA ACATCACTTA TTCCGTCGAA
GGCCGCCCCC TTATGGAGGA GGCCTCTGCC AGCATTCCAA CCGGTCACAA GGTTGGCGTT
GTCGGACGCA ATGGCACCGG CAAGTCCACG CTGTTCCGCC TGATCCGGGG CGAACTGGCG
CTGGAAGGCG GAACAATCAC CCTGCCCTCC AAGGCGCGGA TTGGCGGCGT TGCGCAGGAA
GTGCCCTCCT CGGAGGTGTC GCTGATCGAC ACGGTGCTGG CCGCAGATAC CGAACGTGCC
GCGCTGATGG CGGAGGCCGA CACCGCAACG GATGGCACCC GGATCGCCGA GATCCAGACC
CGTCTGGTGG ATATTGATGC ATGGTCTGCT GAGGCCCGCG CCGCTTCGAT CCTCAAGGGG
CTTGGCTTTG ACGATCAGGA TCAGCTGCGT CCCTGTTCTG ACTTTTCGGG CGGCTGGCGC
ATGCGGGTGG CCCTTGCAGC GGTCCTGTTT GCGCAGCCCG ACCTGCTGCT CCTCGATGAG
CCGACGAACT ACCTCGATCT CGAAGGTGCG CTCTGGCTTG AAAGCTATAT CGCGCGCTAT
CCGCACACGG TTCTGATCGT CTCCCACGAC CGCGGGCTTC TCAATCGCGC GGTGAGCGCC
ATCCTGCATC TCGAGGATCG CAAGCTCACG CTCTATCAGG GGCCTTACGA CACTTTTGCC
GAGACCCGCG CCGCCCGCAT CGCCGTGGCG CAGTCCGAAG CGCAGAAACA GGAAAACCGC
CGCGCGCATC TTCAGAGCTT TGTGGATCGC TTCCGCGCCA AGGCCTCCAA GGCCAAGCAG
GCCCAATCGC GCCTGAAAAT GATCGAGAAG ATGAAGCCGA TCTCGACCCC GCAAGAAGCA
GCGCTGCGTG CCTTCAGCTT TCCCGAACCT GAGGAGATGT CGCCGCCGAT CATCCAGATC
GAAGGCGGGA TCACCGGCTA CGGTGATGTG GAGATCTTGC GGCGTCTGAA CCTGCGGATT
GATCAGGACG ACCGGATCGC GCTGCTGGGC AAGAACGGTC AGGGCAAATC CACGCTCTCC
AAGCTGCTCT CGGACCGGCT GCCTTTGATG GCGGGCAAAA TGGTGCGCTC TTCAAAGCTC
AGGATCGGCT ATTTTGCGCA GCATCAGGTG GATGAGCTTT ATATCAATGA GACCCCGCTG
GACCATCTGC GCCGCCTGCG CCCTGACGAG CCGCCCGCAA AATGGCGCGC GCGCCTTGCA
GGCTTTGGCC TGGGCGCCCA GCAGGCAGAA GTAGAGGTAA AGCGTCTGTC GGGAGGGCAG
AAGGCCCGCC TGAGCCTCCT GCTTGCGACC CTTGATGCGC CGCATATGCT GATCCTCGAC
GAGCCGACGA ACCACCTCGA CATCGAAAGC CGCGAAGCAT TGGTCGAGGC ACTGACCGCC
TATAGCGGCG CGGTCATCCT TGTGAGCCAT GACATGCATC TTCTGAGCAT GGTGGCCGAT
CGTCTGTGGC TGGTCTCGGA GGGAACCGTC AAACCCTATG ACGGCGATCT CGACAGCTAT
CGCGAGATGC TTCTGGCGCG CGACAAACCC GCCGCCAAGG CCGCAACTGT GGCTGCAAGT
GCAGCCGAGA AACGCACTGA GAAACCCAAA CGCGCCAGTC GCGATCAGCT CCTTGCGCTG
CGCTCGGAAG TGCGAAAATC CGAGGCGCGG GTGGAAAAAC TCAGCGAAAT GCGCGAAAAA
CTGGATGCCA AGCTCGCGGA CCCTGCCCTC TATGAAAGTG GCAAACAGGC CGACATCGAA
GTTTGGCAGA AAAAGCATGC CGAGTGCATC GAGGCCTTGG AGCGCGCGGA AGCGATCTGG
ATGGACGCGC TGGAAAAACT GGAGCTAGCA GAAACCTCAT GA
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| Protein sequence | MPFDMRDAML RIENITYSVE GRPLMEEASA SIPTGHKVGV VGRNGTGKST LFRLIRGELA
LEGGTITLPS KARIGGVAQE VPSSEVSLID TVLAADTERA ALMAEADTAT DGTRIAEIQT
RLVDIDAWSA EARAASILKG LGFDDQDQLR PCSDFSGGWR MRVALAAVLF AQPDLLLLDE
PTNYLDLEGA LWLESYIARY PHTVLIVSHD RGLLNRAVSA ILHLEDRKLT LYQGPYDTFA
ETRAARIAVA QSEAQKQENR RAHLQSFVDR FRAKASKAKQ AQSRLKMIEK MKPISTPQEA
ALRAFSFPEP EEMSPPIIQI EGGITGYGDV EILRRLNLRI DQDDRIALLG KNGQGKSTLS
KLLSDRLPLM AGKMVRSSKL RIGYFAQHQV DELYINETPL DHLRRLRPDE PPAKWRARLA
GFGLGAQQAE VEVKRLSGGQ KARLSLLLAT LDAPHMLILD EPTNHLDIES REALVEALTA
YSGAVILVSH DMHLLSMVAD RLWLVSEGTV KPYDGDLDSY REMLLARDKP AAKAATVAAS
AAEKRTEKPK RASRDQLLAL RSEVRKSEAR VEKLSEMREK LDAKLADPAL YESGKQADIE
VWQKKHAECI EALERAEAIW MDALEKLELA ETS
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