| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0941 |
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| Symbol | prfA |
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| ID | 4077335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1003744 |
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| End bp | 1004796 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006244 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_612936 |
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| Protein GI | 99080782 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.301393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCG AAGACCGGCT GCAACAGATT CTGCAACGCT ACCAGTACCT CGAGGCCGCG
ATGGCGGATG GGGCAGGGGG TGATATCGCC AAGCTGGCCA AGGAATATTC CGACCTGCGC
CCGGTGGTGG AGCAGATCAG CGCCTATCAG CAGCTGTTGA GCGATCTGGC CGAGGCCGAA
GAAATGCTGG CCGACCCGGA CATGAAGGCG CTCGCAGAGG AAGAGATCCC GACCCTGAAG
GCCGCACTGC CGCAGGCAGA GCATGCGCTG CAACTCGCGC TTTTGCCCAA GGATGAGGCC
GACAGCCGAG CCGCCATTCT CGAGATCCGA CCCGGCACGG GCGGTGACGA GGCGGCGCTC
TTTGCTGCGG ATCTCTATCG CATGTACAGC CGCTATGCGG AGACGCAGGG CTGGAAAGTG
GATGTCATCG AAGAACAGGC CTCCGAGCTC GGCGGGCTCA AGGAACTGGT GGCGCGGATC
AATGGCGACG GGGTTTTCGC GCGGCTCAAG TATGAAAGCG GCGTGCATCG GGTCCAGCGG
GTGCCCGTGA CCGAGAGCGG CGGGCGCATC CACACCTCTG CGGCGACAGT GGCGGTGCTG
CCAGAGGCCG AGGATGTGGA CATCAAGATC GACGCAAACG ATCTGCGCAT CGACACCATG
CGGGCCTCGG GCGCGGGGGG GCAGCACGTC AACACCACCG ACTCGGCGGT GCGGATCACC
CACCTGCCGA CCGGGCTGGT GGTCACCAGT TCGGAAAAAT CCCAGCACCG AAACCGCGAG
ATCGCAATGC AGGTGCTGAA GACCCGGCTC TATGACCTTG AACGCCAGCG GATCGACACG
GAACGCTCTG CGGATCGGGC TTCTCAGGTG GGGTCGGGAG ATCGTTCGGA ACGTATCCGG
ACCTATAACT TCCCGCAGGG GCGGATGTCG GACCACCGGA TCAACCTCAC GCTTTATAAG
CTCGATCAGA TCATGGGCGG CGACTTGGAT GAAATCATTG ACGCGCTGAT ATCCGAGCAT
CAGGCGAAGC TCCTGGCGGA GATGGGGCAA TGA
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| Protein sequence | MIPEDRLQQI LQRYQYLEAA MADGAGGDIA KLAKEYSDLR PVVEQISAYQ QLLSDLAEAE
EMLADPDMKA LAEEEIPTLK AALPQAEHAL QLALLPKDEA DSRAAILEIR PGTGGDEAAL
FAADLYRMYS RYAETQGWKV DVIEEQASEL GGLKELVARI NGDGVFARLK YESGVHRVQR
VPVTESGGRI HTSAATVAVL PEAEDVDIKI DANDLRIDTM RASGAGGQHV NTTDSAVRIT
HLPTGLVVTS SEKSQHRNRE IAMQVLKTRL YDLERQRIDT ERSADRASQV GSGDRSERIR
TYNFPQGRMS DHRINLTLYK LDQIMGGDLD EIIDALISEH QAKLLAEMGQ
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