| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0890 |
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| Symbol | |
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| ID | 4075987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 950986 |
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| End bp | 951672 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006192 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_612885 |
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| Protein GI | 99080731 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.397549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.908613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAGAC TGACTCCGAT CCTTCTTGCG GTGATTTACG GGCTGGTGAT GTATCGCCTC
TCCGTCTGGC GCACCCACCG CGAATTGAGC GCCCGCTCTA CAGAGCTTGC GGACCCGCAT
CTGAAACGCA TGACCGACCG GCTTGCGGCC GCGCTCGAGC TGCCGCGCAT CCCGGTCTAC
ATCTATGAGA TCGACCCGGT GAATGGCCTT GCCGCGCCCG ACGGGCGGAT TTTCATCACC
CGTGGCTTTT ATCGCAAATT CCAGTCCGGC GAGGTCACCG ATGCCGAATT GGCGAGCGTG
ATCGCCCATG AGCTTGGTCA CGTGGCGCTT GGACATGCCA AGAAACGGAT GATCGATTTC
TCCGGCCAGA ACGCGCTGCG CACGGTGCTG ATGATGGTCA TCGGGCGCTA TATTCCCTTT
GTCGGACCAT GGATCGCGGG GGTTCTCACC AACCTTCTGG CCGCGCGCCT GTCGCGGGGG
GATGAATATG AGGCCGACGA ATATGCGGCC GCCCTGCTGA CCAAGGCCGG TATCGGTGTC
GAGCCGCAGA AAGACCTGTT TCGCAAACTC GAAGAGCTCA CGAATTCTCG GGCCGGGATG
GCCCCCGCAT GGCTCATGAG TCACCCCAAG ACCGAGGAAC GCATCGCCGC GCTGGAGCGG
CTCGAGGACA AGTGGCGCGA GGCCTGA
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| Protein sequence | MLRLTPILLA VIYGLVMYRL SVWRTHRELS ARSTELADPH LKRMTDRLAA ALELPRIPVY
IYEIDPVNGL AAPDGRIFIT RGFYRKFQSG EVTDAELASV IAHELGHVAL GHAKKRMIDF
SGQNALRTVL MMVIGRYIPF VGPWIAGVLT NLLAARLSRG DEYEADEYAA ALLTKAGIGV
EPQKDLFRKL EELTNSRAGM APAWLMSHPK TEERIAALER LEDKWREA
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