Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0855 |
Symbol | |
ID | 4076030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 907552 |
End bp | 909198 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638006153 |
Product | Na+/Pi-cotransporter |
Protein accession | YP_612850 |
Protein GI | 99080696 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1283] Na+/phosphate symporter |
TIGRFAM ID | [TIGR00704] Na/Pi-cotransporter |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGCAT TTTTGATTCA GATCGCGGGC GCTGCGGCGC TATTGTTGTG GGCGGTGCGT CTGGTGCGCA CCGGCGTGGA GCGAGCTTTT GCCACACAGC TGAGACAGGG GCTAAGGCGC GCCTCTGACA ATCGCCTGCT GGCCGCTTTT TCGGGGCTGG TGTCGGCGAT GATGCTGCAG AGCTCCACCG CCGTGGCCAT GCTGGTATCG AACTTTGCCA GCAAGGGCGC GCTCAGTATC GCGGTTGGGA TTGCCATGTT GCTCGGGGCG GATCTTGGCT CTGCCCTTGT GGCGCAGATC CTTCTGGCCC GTCCGGGCAT TCTGGTGCCT GCGCTCCTTC TGGTGGGGGT GGCGCTGTTC CTGCGCAGCG AACAGCGTAA ACTGCGCCAG ACCGGGCGTA TCCTGATCGG GCTTGCGCTG ATTTTTGTCT CGCTCGACAT GCTGCGCACC GCCACAGCAC CAATCATCGA GAGCAAGGGC GCTGTCGCGG TACTGGGGTA TCTCGATTCC GACCTTTTCA CGGCCTTTAT TCTCGGGGCG ATCTTTGCCT GGGTGGTGCA CTCCAGCGTT GCGGCGATCT TGTTGTTTGT CACCATGGTC GCCCAGGGCG CGCTGCCGCC GATGGCGGCG ATGGCGATGG TGCTTGGCGC CAACCTTGGC GGCGCCATGA TCGCCTTTGT GCTGACGCTT GCTGCCGATG TGCGCGCGCG GCGTATCGTG AGCGCCAATC TCGTCTTGCG AGGCGGCGGA GCGCTTGCGG TGCTCTTGGC GCTGAACCTG AACCTTCTGG ACCCCACGTG GCTCGGGCAG GCGGCTGCCG CTCAAGTGAT GGGGCTGCAT CTGGTCTTCA ATCTTGTGCT CTGTCTGCTG GCGCTGCCCT TTGTGGGGCT CATCGCCCGC ATGAGCGAGC GGGTGATGCG CGACCCCAAT GTGCAATCTC TGGGGCGCGG GATGACGGCC TTGGACCCCG CCGCGCTCGA GGACCCGCCG CGTGCGCTGA ACTGTGCCGC GCGCGAGCTG TTGCGCATGG GTGAAGTCAT CGAGAAAATG CTGGTTGCGG CCATGGGGCT CTATGAAGTC TGGGATGACC GCGTCGCCGA GGCGATCCGT GACGAGGATA AGGCACTGCG GCAGATGCAT CTCGACCTCA AGCTCTATCT GGCGGGGATG AACCGTCACA AGCTGGATGA CAGCGCCGTC AATGGCGCGA TCGAGGCATC GCTCATGGCC GCCAACCTGG AGGCGGCCGC CGATCAGGTG GCCCGCAAAA TGACCGATCT GGCGCGCAAG CTCTCGCTTG AAGGGATCAG CTTTTCCAAG AGTGGCCAGC AGGAAATCAA CGATTTCATG GACCGCATTC AAGCCAATGT TCAACTCGCG CTAACGGTCA TGATGACCCG CAACCCCGAT GATGCGCGCG AGCTGGTGGC CGAAAAGGAA AGCATCCGAA CCGCCGAACA AAAACTGCAG AGCAAACACC TGTCGCGCCT TCGCGAAGGC GTCAGCGAAA GCATCGAGAC CAGCGCAATC CATCAGGAAA CCTTGCGCAT TCTCAAACAG GTCAATACCT CTTTTGCGAT GGCAGGGTAT CCGATCCTCG ACGAATCCGG TGATCTGCTG TCCAGTCGCC TGTCCTCGCA GGGCTGA
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Protein sequence | MTAFLIQIAG AAALLLWAVR LVRTGVERAF ATQLRQGLRR ASDNRLLAAF SGLVSAMMLQ SSTAVAMLVS NFASKGALSI AVGIAMLLGA DLGSALVAQI LLARPGILVP ALLLVGVALF LRSEQRKLRQ TGRILIGLAL IFVSLDMLRT ATAPIIESKG AVAVLGYLDS DLFTAFILGA IFAWVVHSSV AAILLFVTMV AQGALPPMAA MAMVLGANLG GAMIAFVLTL AADVRARRIV SANLVLRGGG ALAVLLALNL NLLDPTWLGQ AAAAQVMGLH LVFNLVLCLL ALPFVGLIAR MSERVMRDPN VQSLGRGMTA LDPAALEDPP RALNCAAREL LRMGEVIEKM LVAAMGLYEV WDDRVAEAIR DEDKALRQMH LDLKLYLAGM NRHKLDDSAV NGAIEASLMA ANLEAAADQV ARKMTDLARK LSLEGISFSK SGQQEINDFM DRIQANVQLA LTVMMTRNPD DARELVAEKE SIRTAEQKLQ SKHLSRLREG VSESIETSAI HQETLRILKQ VNTSFAMAGY PILDESGDLL SSRLSSQG
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