| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0852 |
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| Symbol | ugpC |
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| ID | 4076027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 904570 |
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| End bp | 905625 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006150 |
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| Product | glycerol-3-phosphate transporter ATP-binding subunit |
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| Protein accession | YP_612847 |
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| Protein GI | 99080693 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.520251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCA TTACTCTCAA GGATCTTGTG AAATCCTACG GTGACACCGA GGTCCTCCAT
CACATCGACG GTGAAATCAA CGATGGCGAG TTCATCGTGA TCGTCGGCCC GTCGGGCTGC
GGTAAATCCA CCCTCCTGCG CATGATCGCA GGGCTTGAGA CCGTCACCTC TGGCGACATC
AAGATCTGCG ACCGGGTGGT CAATGATCTG GAACCCGCCA ACCGCGACAT TGCGATGGTG
TTTCAGAACT ACGCGCTTTA TCCGCATATG TCGGTGCGCG AAAACATGGG CTACGGTCTC
AAGATCCGTG GCAACAGCAA GGCGGACATC AACCGCCGCG TCGAAGAAGC CGCCGAGATC
CTCGAGATCG GGCAGTATCT CGACCGCAAG CCGCGCCAGC TCTCGGGCGG GCAGCGACAG
CGTGTGGCGA TGGGACGCGC CATTGTGCGC GACCCGCAGG TGTTCCTGTT TGACGAACCC
TTGTCGAACC TCGACGCCAA GCTACGGGTG CAGATGCGTC TTGAGATCCG CAAACTGCAG
CAGCGCCTCG GCGTGACCTC GATCTATGTG ACTCACGATC AGGTCGAGGC CATGACGCTT
GGCGATCGGC TGATGGTGCT CAATGGCGGC TATGTCGAAC AGTTCGGCAC CCCGATTGAG
CTTTATGACC GTCCCGCGAC GCTCTTTGTG GCTGGGTTCA TCGGCTCACC TTCTATGAAC
TTCCTGCCTG CTGAGATCGA CGCCGGCATG GTCACGCTCG AGAATGGAGC GCGGCTTGCG
GGCGGCGGGT CGGCCGCGGG CAAGGTGACA TTGGGTTTGC GCCCGGAGCA TCTTGTGGCA
GATGATAACG GCCCCGTTGA GGTCAACGTG CAACTCTGCG AGCAACTCGG CGCGATCACG
CTTCTGCATG GCCACCTCAA TGGCACCGAT ACAGAATGCG TCGCCAGCAT GCCCGGTCAT
GTAACAGCCG CCCCTGGCAC CCTGATGCGG TTTTCAATCG CGCCGGAGAA CCTGCATATG
TTTGATCCCC AGACCGGCAA GCGGGTGGCG GAATGA
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| Protein sequence | MASITLKDLV KSYGDTEVLH HIDGEINDGE FIVIVGPSGC GKSTLLRMIA GLETVTSGDI
KICDRVVNDL EPANRDIAMV FQNYALYPHM SVRENMGYGL KIRGNSKADI NRRVEEAAEI
LEIGQYLDRK PRQLSGGQRQ RVAMGRAIVR DPQVFLFDEP LSNLDAKLRV QMRLEIRKLQ
QRLGVTSIYV THDQVEAMTL GDRLMVLNGG YVEQFGTPIE LYDRPATLFV AGFIGSPSMN
FLPAEIDAGM VTLENGARLA GGGSAAGKVT LGLRPEHLVA DDNGPVEVNV QLCEQLGAIT
LLHGHLNGTD TECVASMPGH VTAAPGTLMR FSIAPENLHM FDPQTGKRVA E
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