| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0826 |
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| Symbol | |
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| ID | 4077532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 867997 |
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| End bp | 868806 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006124 |
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| Product | hypothetical protein |
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| Protein accession | YP_612821 |
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| Protein GI | 99080667 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3926] Putative secretion activating protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000568663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.254553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGA ACTTCGACCG AAGCCTTGAT TGGGTTCTGG CCCATGAAGG CGGTTATGTG
AACCACCCCA AGGATCCGGG GGGAGCCACG AATATGGGTG TCACTCAGCG CACGTATGAT
GCCGATCTGC GGCGTCGTCA GCTCTCATCT CGCAGCGTGA AACTGATCAC CATGGAAGAG
GTGAAGGCGA TCTATCGCAG CCAATACTGG GACAAGGTGG GTGGCGATGA GCTTCCCGGG
GGCTTGGACT ACTGCGTCTT TGACTTCGCG GTAAATAGCG GTGTTTCGCG CGCAGTGAAG
TTCATGCAGC GCCAGCTCGG CGTCAAGGCT GATGGGATTG TCGGGGTGAA CACCATGGAA
GCCGTAGACC GCGCGGACGT CGAAGGGTTG ATCCAGTCTA TCTGTCAGGC TCGGTTCTCC
TGGCTGAAGA AGCTGCGCCA CTGGGGCACG TTTGGCCGCG GCTGGACACG CCGGGTGATG
GGGGAAAGCC TCGGCGTTCA GGCGCGCGAC ACCGGCGTGA TCGATCGCGC TGTCTACCTC
CATCGTGAAC TTGCCGTCAT TCACGCGCCG TCCTATCGCG AGGATGGTTC GGGGGCCCGC
GCCGAGGACG GTGAACGGAG CCTGTCTGCC ACGGTCAAGG AGTTGATCAC GTCTGGTAAG
GGGTGGACCA ATGGCGGCGC TTTGGGTGGC GGCGCAATCG CCCTCACACA GCTTCAAGGC
CCTGTTGCCT ACGCCTTGGC CGCTGTGCTT CTGATTGCTG CTGTGACCGC CGCTCTGTAC
TTCCTGCGAT CGCAGGAGGC TGAGGCATGA
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| Protein sequence | MQKNFDRSLD WVLAHEGGYV NHPKDPGGAT NMGVTQRTYD ADLRRRQLSS RSVKLITMEE
VKAIYRSQYW DKVGGDELPG GLDYCVFDFA VNSGVSRAVK FMQRQLGVKA DGIVGVNTME
AVDRADVEGL IQSICQARFS WLKKLRHWGT FGRGWTRRVM GESLGVQARD TGVIDRAVYL
HRELAVIHAP SYREDGSGAR AEDGERSLSA TVKELITSGK GWTNGGALGG GAIALTQLQG
PVAYALAAVL LIAAVTAALY FLRSQEAEA
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