Gene TM1040_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0754 
Symbol 
ID4076163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp810223 
End bp810717 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content60% 
IMG OID638006051 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_612749 
Protein GI99080595 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.180315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA TCGACTACAC CCGCGCTGCC AAATACTTCC TGCTGCAAGA CGTGTGGCAG 
GGGTTCAAGC TGGGGCTGAA GTATTTCTTC GCCCCCAAGG CAACGATCAA CTACCCGCAT
GAAAAAGGTC CGCTCAGCCC GCGTTTCCGC GGCGAGCACG CGTTGCGTCG CTATCCCAAC
GGCGAAGAGC GCTGCATTGC CTGCAAACTC TGCGAAGCGG TATGTCCGGC ACAGGCCATC
ACTATCGATG CCGAACCGCG TGAAGACGGC AGCCGCCGCA CCACGCGCTA TGACATCGAC
ATGACCAAAT GCATCTACTG CGGGTTCTGC CAGGAGGCTT GCCCGGTGGA CGCCATTGTC
GAGGGGCCGA ATTTTGAATT CGCCACCGAG ACCCGCGAGG AGCTGTTCTA CGACAAGGAC
AAGCTGTTGG CGAATGGCGA GCGCTGGGAA GCCGAGATTG CCCGCAATCT TGAGCTGGAC
GCGCCCTACA GATGA
 
Protein sequence
MTQIDYTRAA KYFLLQDVWQ GFKLGLKYFF APKATINYPH EKGPLSPRFR GEHALRRYPN 
GEERCIACKL CEAVCPAQAI TIDAEPREDG SRRTTRYDID MTKCIYCGFC QEACPVDAIV
EGPNFEFATE TREELFYDKD KLLANGERWE AEIARNLELD APYR