Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0754 |
Symbol | |
ID | 4076163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 810223 |
End bp | 810717 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006051 |
Product | NADH dehydrogenase subunit I |
Protein accession | YP_612749 |
Protein GI | 99080595 |
COG category | [C] Energy production and conversion |
COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.180315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA TCGACTACAC CCGCGCTGCC AAATACTTCC TGCTGCAAGA CGTGTGGCAG GGGTTCAAGC TGGGGCTGAA GTATTTCTTC GCCCCCAAGG CAACGATCAA CTACCCGCAT GAAAAAGGTC CGCTCAGCCC GCGTTTCCGC GGCGAGCACG CGTTGCGTCG CTATCCCAAC GGCGAAGAGC GCTGCATTGC CTGCAAACTC TGCGAAGCGG TATGTCCGGC ACAGGCCATC ACTATCGATG CCGAACCGCG TGAAGACGGC AGCCGCCGCA CCACGCGCTA TGACATCGAC ATGACCAAAT GCATCTACTG CGGGTTCTGC CAGGAGGCTT GCCCGGTGGA CGCCATTGTC GAGGGGCCGA ATTTTGAATT CGCCACCGAG ACCCGCGAGG AGCTGTTCTA CGACAAGGAC AAGCTGTTGG CGAATGGCGA GCGCTGGGAA GCCGAGATTG CCCGCAATCT TGAGCTGGAC GCGCCCTACA GATGA
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Protein sequence | MTQIDYTRAA KYFLLQDVWQ GFKLGLKYFF APKATINYPH EKGPLSPRFR GEHALRRYPN GEERCIACKL CEAVCPAQAI TIDAEPREDG SRRTTRYDID MTKCIYCGFC QEACPVDAIV EGPNFEFATE TREELFYDKD KLLANGERWE AEIARNLELD APYR
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