| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0739 |
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| Symbol | |
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| ID | 4076109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 797797 |
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| End bp | 798663 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006036 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | YP_612734 |
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| Protein GI | 99080580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.5891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.963586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACC GCGTCGAGAT CTTTGAGGTG GGCCCACGCG ACGGGCTGCA GAACGAAAAG
CGTGACATTC CTGTCGCCGA CAAGGTGGCC CTGGTGGATT GTCTCAGTCG TGCAGGCTTT
TCCCGGATCG AGGTGGCGAG TTTTGTCTCC CCCAAATGGG TGCCGCAGAT GGCGGGCAGC
GCAGAGGTTC TGGCCGGGAT CACCAAGGCC AAAGGCGTGC GCTATGCGGC GCTCACCCCG
AATATGCGCG GCTATGAGGA TGCGCTGGCC GCGCGCGCTG ATGAAATCGC CATCTTTGCC
TCTGCCTCCG AGGGCTTTTC ACAAGCCAAT ATCAATGCAT CGATTGCTGA GAGTATCGAG
CGCTTTACAC CCATTCTGGA GGCCGCGCGT CATATCGATC TGCCGGTGCG GGGTTATGTC
TCCTGCGTGA CCGACTGCCC CTATGATGGC GCTGTCGCAC CCGACAAAGT CGCCGAGGTC
GCGGATCGGC TGTTCTCGAT GGGCTGCTAT GAGATTTCGC TTGGCGATAC TGTGGGAAAG
GCCACACCCG ACAAGATCGC CAAGATGTTG ATCGCGGTCA AAGATGCGGT GCCAGTCACC
CGCCTCGCAG GTCACTATCA CGACACCGCA GGCCGTGCGA TTGCCAATAT AGATGCGTCG
CTTGCGCTGG GCGTGCGGGT GTTTGACGCT GCCGTTGGCG GGCTTGGTGG CTGCCCCTAT
GCGCCGGGCG CGGCAGGGAA TGTGGCCACA GAGGTGGTCC ACGAACATTT GACGCGGCTG
GGGTATGACA CGGGCCTTGA TGGCACCGTA CTGCAAGAGG CCGCCGCCAT GGCGCGGCAC
TTGCGCCCCG AGCCCACCGA CGCCTGA
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| Protein sequence | MKDRVEIFEV GPRDGLQNEK RDIPVADKVA LVDCLSRAGF SRIEVASFVS PKWVPQMAGS
AEVLAGITKA KGVRYAALTP NMRGYEDALA ARADEIAIFA SASEGFSQAN INASIAESIE
RFTPILEAAR HIDLPVRGYV SCVTDCPYDG AVAPDKVAEV ADRLFSMGCY EISLGDTVGK
ATPDKIAKML IAVKDAVPVT RLAGHYHDTA GRAIANIDAS LALGVRVFDA AVGGLGGCPY
APGAAGNVAT EVVHEHLTRL GYDTGLDGTV LQEAAAMARH LRPEPTDA
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