| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0708 |
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| Symbol | pntA |
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| ID | 4076985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 761076 |
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| End bp | 762650 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006005 |
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| Product | NAD(P) transhydrogenase subunit alpha |
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| Protein accession | YP_612703 |
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| Protein GI | 99080549 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.368704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAATAG GCACACCAAA AGAAATAGCC GAGGGCGAGT CGCGCGTTGC GATGACGCCA
GCCTCGGCAA AAGATCTTCA GAAGCTGGGG TTTGAGTGCT GCATTGAGGC AGGCGCCGGG
GAAGCTGCGG GCTTTACCGA TGCGGCCTAC GCCGAAGCCG GTGTTGAGGT CATCAAGACC
GCCGCCGGGC TGTGGAAGGC CGCCGATATC ATCGCTAAGG TGCGCGCGCC CTCCGAGACC
GAGCTGAAGC GGCTCAACAA ATCCAAGACC CTGATTTCCT TCTTCAACCC GGGCGGCAAT
GAAGAGGGCC TCGAGCTCGC GAAATCCAAG GGCGCGACCG TGATCGCTAT GGAAATGGTG
CCGCGCATCA GCCGCGCGCA AAAGATGGAC GCACTGAGCT CCATGGCCAA TATCGCGGGC
TACCGCGCGG TGATCGAGGC GGGCAACAAC TTTGACCGGT TCTTCACCGG CCAGATCACC
GCTGCGGGCA AGGTGCCCCC GGCCAAGGTG CTGGTCGTGG GCGCAGGAGT TGCGGGCCTC
GCGGCAATCG GCACCTCCAC CTCGCTAGGC GCGGTGACCT ATGCGTTTGA CGTGCGCCCC
GAAGTGGCCG AACAGGTCGA GTCGATGGGT GCCGAGTTTG TCTACCTCGA CTTTGAGGAA
GAACAGCAGG ATGGCGCGGC CACAGGCGGT TACGCGTCTG TTTCGAGCCC CGAGTTCCGA
GAGGCCCAGC TGGCCAAATT CCGCGAACTG GCGCCCGAAA TGGACATCGT GATCACCACC
GCGCTGATCC CCAACCGCGA GGCGCCGAAG CTCTGGCTGG CGGATATGGT CGCGGCGATG
AAGCGCGGTT CAGTGATTGT GGACCTTGCG GCCGAGCGCG GCGGCAACGT CGAAGGCACC
GTGAAGGACG AGAAAGTCGT CACCGATAAC GGCGTGACCA TCATCGGCTA CACCGACTTC
CCAAGCCGCA TGGCGAGCCA GTCCTCCAGC CTCTATGCCA CCAACATCCG TCACATGATG
ACCGATCTCA CCCCGGAAAA GGACGGTCAG GTGGTGCATG ACATGGAGGA TGACGTGATC
CGCGGGGCCA CTGTGACCCA CGCAGGCGAG ATCACCTTCC CACCGCCGCC GCCCAAGGTG
CAGGCCATTG CGGCGCAAAA GAAGCCCGAA GCCCCCAAGG AGCTGACGGC CGAGGAAAAA
CGCGCCGCAG AAGTCGCCGC CTTCAAACAA CAGACCAAAA ATCAGGTCAC ATTGCTTGCG
GTCGGCGCTG CGTTGCTCCT GGCGGTGGGG CTGGTGGCCC CTGCAAGCTT CATGCAGCAT
TTCATCGTCT TTGTGCTCTC GGTCTTTGTG GGCTTCCAGG TGATCTGGAA CGTCTCGCAC
TCCCTACACA CGCCGCTGAT GGCGGTCACA AATGCGATCT CCTCGATCAT CATTCTCGGC
GCCCTGATGC AGATCGGCTC TGGTTCCTGG TTGGTGATTT TCCTGGCCGC TCTCAGTGTC
TTTATGGCCG GGATCAACAT CTTTGGCGGC TTCCTCGTGA CACGGCGCAT GCTCGCCATG
TTCCAGAAAT CCTAA
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| Protein sequence | MKIGTPKEIA EGESRVAMTP ASAKDLQKLG FECCIEAGAG EAAGFTDAAY AEAGVEVIKT
AAGLWKAADI IAKVRAPSET ELKRLNKSKT LISFFNPGGN EEGLELAKSK GATVIAMEMV
PRISRAQKMD ALSSMANIAG YRAVIEAGNN FDRFFTGQIT AAGKVPPAKV LVVGAGVAGL
AAIGTSTSLG AVTYAFDVRP EVAEQVESMG AEFVYLDFEE EQQDGAATGG YASVSSPEFR
EAQLAKFREL APEMDIVITT ALIPNREAPK LWLADMVAAM KRGSVIVDLA AERGGNVEGT
VKDEKVVTDN GVTIIGYTDF PSRMASQSSS LYATNIRHMM TDLTPEKDGQ VVHDMEDDVI
RGATVTHAGE ITFPPPPPKV QAIAAQKKPE APKELTAEEK RAAEVAAFKQ QTKNQVTLLA
VGAALLLAVG LVAPASFMQH FIVFVLSVFV GFQVIWNVSH SLHTPLMAVT NAISSIIILG
ALMQIGSGSW LVIFLAALSV FMAGINIFGG FLVTRRMLAM FQKS
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