| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0691 |
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| Symbol | |
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| ID | 4077358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 741250 |
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| End bp | 742101 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005988 |
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| Product | competence lipoprotein ComL, putative |
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| Protein accession | YP_612686 |
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| Protein GI | 99080532 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0174924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000229911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCGGCA TCAGGGCAGC AGCCAAAGGG ATCGGAGTGG TCGCGCTGAT GGCGACCCTT
GCCGCATGCG GCGGCGCGGA TGGGGATGCG CAGCGGTCGT CTTTGGATCT TGAAGGGTTC
TCGCCCGCCC AGATTTACGA GCGCGGCGAA TTCGAACTGG CCCGCAGTCG TGAAAAAGAT
GCGGCCTATT TCTTTTCCGA GGTCGAGCGG CTCTATCCCT ATTCCGAATG GGCCAAGCAG
TCCCTGATCA TGCAGGCCTT CACCTACCAT CAGGCCGAAG ACTACGAGAA CAGCCGTTCC
GCCGCGCAGC GCTATATTGA CTTTTATCCG ACAGATGCTG ATGCCGCCTA TGCGCAGTAT
CTTCTCGCCC TGAGCTACTA TGACCAGATT GACGAAGTCG GGCGTGATCA GGGGCTGACC
TTCCAGGCTC TGCAAGCGCT GCGGACCGTA ATCGAGGTCT ATCCCGAGAG CGAATATGCC
AGCTCTGCCA TCCTCAAGTT TGATCTCGCC TTTGACCACC TTGCGGGCAA AGAAATGGAA
ATCGGTCGCT ATTATCTGAA ACGCCAGCAC TATTCGGCAG CGATCAACCG CTTCCGTGTG
GTGGTGGAAG ATTTCCAGAC AACGTCCCAC ACGGCAGAGG CGCTCTATCG CCTGATCGAG
GCGTATCTGT CGCTTGGTCT CACGGATGAG GCGCAGTCTG CTGGCGCGAT CCTCGGTCAT
AACTTCCAGT CGACTGATTG GTACGAGGAT GGCTATCGGT TGCTGACCGC TCAGGGGTTG
AAGCTCAAGG ATCGCGGCAA CAACTGGCTT GCCAAGATCT ATCGTCAGTC GATCAAGGGC
CAATGGCTCT GA
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| Protein sequence | MIGIRAAAKG IGVVALMATL AACGGADGDA QRSSLDLEGF SPAQIYERGE FELARSREKD
AAYFFSEVER LYPYSEWAKQ SLIMQAFTYH QAEDYENSRS AAQRYIDFYP TDADAAYAQY
LLALSYYDQI DEVGRDQGLT FQALQALRTV IEVYPESEYA SSAILKFDLA FDHLAGKEME
IGRYYLKRQH YSAAINRFRV VVEDFQTTSH TAEALYRLIE AYLSLGLTDE AQSAGAILGH
NFQSTDWYED GYRLLTAQGL KLKDRGNNWL AKIYRQSIKG QWL
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