Gene TM1040_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0687 
Symbol 
ID4077354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp735425 
End bp736324 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content62% 
IMG OID638005984 
Productcell division protein FtsQ 
Protein accessionYP_612682 
Protein GI99080528 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0983299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000241 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGAGCGC TGACCTCTCG TTTGTCCCGC AGCCGCGCAG GTGAAAGCAA AGCTGACCCA 
GCGCCTTCAC GATTGAAATA CCGGATCCAG CGCTGGATGT TGACGCCGGG CATTCGAACC
GGTTTGCGGG TGGGGCTTCC GCTCGGGGTT CTTTTTATCG CTGCCGGGAG TTATCTGGCC
AGCGAGACCC GCCGCGATCA TCTGATGGCT CTTTATAATG AGGCCCGCGC CTCCTTTGAG
ACCCGTCCGG AATTCATGGT CAACGTCATG GCAATCGACG GCGCGGGCGA AAGTGTGGCG
ACCGATATTC GCGAGGTGAC CTCGCTGGAT CTTCCGGTCA GTTCCTTTGA TCTTGATCTG
GCGGCCATTC GCGATCTGAT CGTGGGGCTT GATCCTGTGA AAACCGCATC GGTGCGGATC
CGGCCCGGAG GGATCCTGCA GGTTGATGTG GAAGAGCGCG AACCAGCAAT TGTCTGGCGC
AGCCGCGATG GGCTGGCGCT GCTGGATGAG ACCGGTGCAT TTGTGGCCGA GCTTGGCCAG
CGCAGCCTGC ATCCGGATCT GCCGCTGATC GCTGGGCGGG GGGCGGATGA ACGCGCTCCC
GAGGCACTGC GCCTTTTTGC GGCCGCGCGC CCGCTAGGCA GTCGTTTGCG CGGCATCGTG
CGTATCGGCG AGCGCCGCTG GGACGTGGTT CTGGACCGTG GCCAGCGTAT TCAGCTGCCT
GTAAAGCGCC CTGTCGCGGC GCTTGAGCGG GTAATCGCGG TCAGCGAAGT CAAAGATCTG
TTGGAACGGG ATGTCGCAGT CGTGGATCTG CGCCTGCCCA CGCGTCTAAC CGTTAGAATG
AACGCGCCAG CCGTAGAGGA CTGGTGGCGC ATCCGTCAAT TGAATGAGAG CTCCTATTGA
 
Protein sequence
MRALTSRLSR SRAGESKADP APSRLKYRIQ RWMLTPGIRT GLRVGLPLGV LFIAAGSYLA 
SETRRDHLMA LYNEARASFE TRPEFMVNVM AIDGAGESVA TDIREVTSLD LPVSSFDLDL
AAIRDLIVGL DPVKTASVRI RPGGILQVDV EEREPAIVWR SRDGLALLDE TGAFVAELGQ
RSLHPDLPLI AGRGADERAP EALRLFAAAR PLGSRLRGIV RIGERRWDVV LDRGQRIQLP
VKRPVAALER VIAVSEVKDL LERDVAVVDL RLPTRLTVRM NAPAVEDWWR IRQLNESSY