Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0674 |
Symbol | |
ID | 4077282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 721127 |
End bp | 721825 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638005971 |
Product | NAD-dependent deacetylase |
Protein accession | YP_612669 |
Protein GI | 99080515 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0243774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.233904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TCGTGATCCT CACCGGCGCA GGAATTTCAG CAGAAAGCGG GCTTGGCACG TTTCGCGATA AAGGAGGCCT GTGGTCGCAG CATCGGATCG AGGATGTTGC AACGCCCGAA GGATTTGCTC GCGATCCGGA ACTTGTGCAC AGGTTTTATT CCGCACGGCG CCAGCACGCG GCAGAAGCCC TACCCAACGC GGCCCATGAC GCGCTGGCAC GTCTTGAAGA ACGGTGGACT GGTGACGTGA TCATCATAAC GCAGAACGTC GATGGCCTTC ATGAGAAAGC AGGCTCTCGC GGTGTGCTGC ACATGCATGG CGCGCTCTCA GGCGCGCTCT GTGCCGCCTG TGCGCACCGT TGGCCCGCCC CGCTCCAGAT GACGCCCGAA ACCCGGTGTC CTGCCTGTGA CGCAAACACG GCTCGGCCGG ATGTGGTCTG GTTTGGCGAG GTTCCCTATC ATATGGAGCA AATCGCAAGC CATCTCGCAG AGGCCGATCT CTTTGTTGCC ATTGGCACCT CGGGTCAGGT CTATCCGGCA GCGGCGTTTG TCCAAGAGGC GGCCACATAC GGCGCGCAGA CGCTCGAACT CAACCTCGAA CCCTCGGAAG TGAGTGCAGA TTTTGCACAG CATCGCTTTG GCAAGGCCTC CGACGTTGTT CCGATCTGGG TAGAGGACCT CCTGCGGGAC GCTGCGTAA
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Protein sequence | MKKIVILTGA GISAESGLGT FRDKGGLWSQ HRIEDVATPE GFARDPELVH RFYSARRQHA AEALPNAAHD ALARLEERWT GDVIIITQNV DGLHEKAGSR GVLHMHGALS GALCAACAHR WPAPLQMTPE TRCPACDANT ARPDVVWFGE VPYHMEQIAS HLAEADLFVA IGTSGQVYPA AAFVQEAATY GAQTLELNLE PSEVSADFAQ HRFGKASDVV PIWVEDLLRD AA
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