| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0651 |
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| Symbol | |
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| ID | 4078164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 696203 |
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| End bp | 698143 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005948 |
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| Product | AsmA |
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| Protein accession | YP_612646 |
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| Protein GI | 99080492 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.639423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA TCCTCCGTAT TCTTTCCGCC ATCGTGATCA CCATTGCCGT TGGCGTCGCG
ATTTTGACCT TTCTGCCCGG CCAAAAGATC GCTGAATTGG CCGCGCAGCA AATCGAGAAG
CAGACCGGGC GTCAGGTGGT GTTTGGCGGT GACGTGCGAT TCTCCTTCTG GCCGACGCTG
GGTATTCAGG CCGATGACGT CGCCCTTGCC AACGCGGATT GGGCCGGGCC AGAGCCGCTT
TTGACGGCGG GGCGGCTCAC GATTGGCGTG GATGCCGCAG ATTTGATCCG CGGCGACATC
CGGATCACGG AGCTGACGGC GATTGTGCCC CATCTCAATC TTGAGACCCG CGAAGATGGC
ATTGGCAACT GGGTCTTTGA TGCGCCCGCC GTGGGCGAAA CGCCCGCCCA GGTTGAGACC
GACGCAGAAG GTGAAGGGAC GTCCGTCGCG ATCGAGGCCA TCACGCTGCG TGGGGCGTCG
CTGCGCTATG CGGCCCATGG GCAGGATGTT GTCGAAACCA ACCAAGTGGA CCTGCAACTC
GCGTGGCCCG ATCCCAACGG TACGGCAAAC GTTGATCTGA CCCTGCGCCC TGCCGGAAAG
CCGCTCCGGA TTGCAGGGGA GGTAGGCAGT TTCAGGCGGT TCTTGCTTGG TGAGGTCGCT
TCCCTCGGGG TGACGGTCAC GGCCGAGGCA AGCAAGCTGC GCTTTGATGG GCAGGCGGAT
CTGAGCGGGG CGTTTGATGG GCGCATCACC GGGGCAAGCG ACGACACCAG TGCGCTCCTG
GTGGCCTTGG GGCAGGCGGC GGTTGATCTT CCCAAAGGTC TTGGGCGCGC AATGACTTTT
GCTGCTGACA CGACCTATAC ACCGGACGGG CGGGTGTCGC TGCGCGATCT GAGCCTAGCC
CTGGATCACA ACGCGCTGCG CGGGGATGCG GATCTGAACC TTGCGGCGTC TCCGCTCAAG
GTGACGGCCG CCTTGGAGGG AGATATGCTG GACCTCAGCG CGCTCGGAGC GCCGACGACA
GGCGCCGGGG GCAACACCGC GGAGCCTGCG ACGCAAGGAT GGTCGACCAC GCCGATCGAT
GCGTCCATGC TTGCGCTTAT CGAGGGGGAT ATCTCGCTGG ATGTGAAGGG GCTTCAGACG
TCCTCGGTGA TATTTGGTCC CAGCCGGATG ACGCTGAGCA TCGAGCGGGC GCGGGCGGTT
CTATCTTTCC TGCCGGTACA GGCTTTTGGC GGAACGCTTC AGGGGGAGTT GATTGCGAAC
AATCGAAATG GGCTCTCGGT GGCGGGCAAC CTCCAGTTTG CCAATGTCGA GATGCGCGAG
GCGCTGGGGC AATTGGCAGG GTATGACAAG CTCAACGGGG AGGCGCTCGG TAATCTGGAG
TTCCTCGGCG TCGGCAATTC CATGGACCAG ATCATGCGCT CGCTTGATGG CAAGGGGCGC
GTTGAGCTGG GCAAAGGGTT TTTCACCGGG TTTGACTTGC AATCGGTCAT GGACCCGAAC
GGCGGCAATG GTGGGACAAC CATCTTTGAA GGTCTGACCG CAAGCTTTGA CATGATTGAT
GGGACCTTGC GCAATGACGA TCTGAATGCG GCGCTCAAGG TCCTGAAGGC CGCAGGCGCG
GGGCGCGTCG GGCTTGGATC GCAGGATCTG GATTATACGT TTACCCCCAC GGCCTTTGCG
AGCGAGACCT CTGCAGGCGT GTCGGTACCG GTGCGGATAC AGGGATCGTG GTTCGACCCC
GAGATCAAAC CCGATCTGAG CAAGCTAGTG CAGCCAAAAT TGGATGAGGC CGAAGAAAAG
GCAAAACAGG CTGTGCGTGA CAAGCTGAGC GACGAGCTCG GGGTGCCGGT GGAAACTGAG
GAAGACCTGA ACGATGCGCT AAAACGCCGG GTCGAAGAAG AGGCGCGCAA GCAACTGCTG
AAGTTTCTCG GCAGCGATTG A
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| Protein sequence | MRLILRILSA IVITIAVGVA ILTFLPGQKI AELAAQQIEK QTGRQVVFGG DVRFSFWPTL
GIQADDVALA NADWAGPEPL LTAGRLTIGV DAADLIRGDI RITELTAIVP HLNLETREDG
IGNWVFDAPA VGETPAQVET DAEGEGTSVA IEAITLRGAS LRYAAHGQDV VETNQVDLQL
AWPDPNGTAN VDLTLRPAGK PLRIAGEVGS FRRFLLGEVA SLGVTVTAEA SKLRFDGQAD
LSGAFDGRIT GASDDTSALL VALGQAAVDL PKGLGRAMTF AADTTYTPDG RVSLRDLSLA
LDHNALRGDA DLNLAASPLK VTAALEGDML DLSALGAPTT GAGGNTAEPA TQGWSTTPID
ASMLALIEGD ISLDVKGLQT SSVIFGPSRM TLSIERARAV LSFLPVQAFG GTLQGELIAN
NRNGLSVAGN LQFANVEMRE ALGQLAGYDK LNGEALGNLE FLGVGNSMDQ IMRSLDGKGR
VELGKGFFTG FDLQSVMDPN GGNGGTTIFE GLTASFDMID GTLRNDDLNA ALKVLKAAGA
GRVGLGSQDL DYTFTPTAFA SETSAGVSVP VRIQGSWFDP EIKPDLSKLV QPKLDEAEEK
AKQAVRDKLS DELGVPVETE EDLNDALKRR VEEEARKQLL KFLGSD
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