Gene TM1040_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0610 
Symbol 
ID4078123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp649537 
End bp649950 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID638005907 
Productheat shock protein Hsp20 
Protein accessionYP_612605 
Protein GI99080451 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.127052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAAAC TTACCTTGGG CTCATACCCT CACATGCTGG GCTTCGAGCA ACTGGAACGC 
CTGCTAGAGC GCTCTGCCAA ATCTGGCAAT GAGGGCTATC CTCCCTACAA TATCGAACAG
ACATCTGACC ATTCCTACCG CATCACCCTC GCTGTGGCCG GATTCGCGGA AGAGGATCTG
GCGATTACGG TCGAGGACAG GCAGCTGGTG ATTCGTGGCC GACAGCGTGA CGACTCGGAC
GGGCGCATCT TCCTGCATCG TGGGATCGCC GCACGCCAGT TTCAGCGCAT GTTCGTTCTC
GCGGATGGCG TCGAAGTCGG GGAAGCCGTG ATGGAGAACG GACTGCTTCA TGTGGATCTC
ACGCGCTCAC GTCCCGAAAC CGTTGTGCAA ACCATCAATA TCAAAAAGGG GTAA
 
Protein sequence
MSKLTLGSYP HMLGFEQLER LLERSAKSGN EGYPPYNIEQ TSDHSYRITL AVAGFAEEDL 
AITVEDRQLV IRGRQRDDSD GRIFLHRGIA ARQFQRMFVL ADGVEVGEAV MENGLLHVDL
TRSRPETVVQ TINIKKG