Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0610 |
Symbol | |
ID | 4078123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 649537 |
End bp | 649950 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638005907 |
Product | heat shock protein Hsp20 |
Protein accession | YP_612605 |
Protein GI | 99080451 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.127052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGAAAC TTACCTTGGG CTCATACCCT CACATGCTGG GCTTCGAGCA ACTGGAACGC CTGCTAGAGC GCTCTGCCAA ATCTGGCAAT GAGGGCTATC CTCCCTACAA TATCGAACAG ACATCTGACC ATTCCTACCG CATCACCCTC GCTGTGGCCG GATTCGCGGA AGAGGATCTG GCGATTACGG TCGAGGACAG GCAGCTGGTG ATTCGTGGCC GACAGCGTGA CGACTCGGAC GGGCGCATCT TCCTGCATCG TGGGATCGCC GCACGCCAGT TTCAGCGCAT GTTCGTTCTC GCGGATGGCG TCGAAGTCGG GGAAGCCGTG ATGGAGAACG GACTGCTTCA TGTGGATCTC ACGCGCTCAC GTCCCGAAAC CGTTGTGCAA ACCATCAATA TCAAAAAGGG GTAA
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Protein sequence | MSKLTLGSYP HMLGFEQLER LLERSAKSGN EGYPPYNIEQ TSDHSYRITL AVAGFAEEDL AITVEDRQLV IRGRQRDDSD GRIFLHRGIA ARQFQRMFVL ADGVEVGEAV MENGLLHVDL TRSRPETVVQ TINIKKG
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