| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0608 |
|---|
| Symbol | |
|---|
| ID | 4078121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 647574 |
|---|
| End bp | 649058 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638005905 |
|---|
| Product | phosphate transporter |
|---|
| Protein accession | YP_612603 |
|---|
| Protein GI | 99080449 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0306] Phosphate/sulphate permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0822433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.70897 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCAAA ACGATCTAGA GCCGCGTCAC CTTGAAACCC TGGACCGCGA CCTTGATCGC
CTGTCCTCGC TGGAACAGGC GACAGCCTAT GTGGGGCGGT CGAATGTCGG GCTTGGTCTC
GCCTTCATGT TCATCCTGAT CGTCGCTGCA GCGACCGGAT TGATGCTCGG CAGTGCCGAC
AACACGTTTA TCATCGTGAT CGCCGCCGCC TTTGGCGCCT ATATGGCGCT CAATATTGGG
GCCAATGATG TGGCCAACAA CATGGGTCCT GCGGTTGGGG CAAACGCCAT GTCGATGGGC
TTTGCCATCG TGGTTGCGGC CATCTTTGAG AGCGCGGGCG CCCTGATTGC GGGCGGAGAT
GTGGTTTCGA CCATCGCCAA AGGGATCATC TCGCCCGATA CCATGGCGAC CTCTTCGATG
TTCATCGCCG CTATGCTTGC CGCCCTTCTG GCCTCGGCAC TCTGGGTCAA CCTTGCAACC
TGGATCGGTG CACCTGTTTC CACCACGCAT GCGGTTGTAG GGGGCGTCAT GGGCGCCGGG
ATCGCGGCCG CCGGTTTTGC CGCCGTGAAC TGGAGTAAAA TGAGCGCAAT CGCCGCCAGC
TGGGTGATCT CGCCGCTCTT GGGTGGACTG ATCGCGGCCG GGTTCCTGTG GCTCATCAAG
TCGCGCATCA TCTACCGCGA AGACAAGATT TCTGCAGCGC GCACCTGGGT CCCCATTCTG
GTGGGCATCA TGGCGGGAGC ATTCGCCTCT TACCTCGCGG TCAAAGGCCT GAAAAAGCTC
ATCAAAATTG ACCTCTCGCA TTCACTGATG ATTGGTCTTG TGGTTGCGCT TCTGGTCTGG
ATGCTCATGA TCCCCGTGAT CCGCAAACAG TCGAAGGGAT TGGAGAACAG AAACAAATCG
CTGAAGGTGC TCTTCTCGAT CCCACTGATT GTCTCGGCGG CCCTGCTGAG CTTTGCGCAT
GGTGCAAACG ATGTGGCAAA CGCGGTTGGA CCGCTTGCGG CAATCGTGCA GGCGTCGACC
TCTGGGGATT TCACCCATGC AGTCTCAATC CCTTTCTGGG TGATGATTAT CGGGGCCTTC
GGGATTTCCT TTGGTCTCTT CCTGTTTGGC CCCAAACTGA TCCGCATGGT GGGCAGCCAG
ATCACCAAAC TGAACCCGAT GCGGGCATAT TGCGTGGCGC TGTCTGCGGC CATCACGGTG
ATCGTGGCAA GCTGGCTCGG CCTTCCGGTG AGCTCCACAC ATATCGCGAT TGGCGGCGTC
TTTGGCGTTG GATTCTTCCG CGAATGGGAC ACAGAGCGCC GCATGCGCAA GTCTAAGGCC
GTCAAGGCAG ATGCGCCCAA CGTAGGCCCC GAAGAGCGCC GCCGCCGCAA ACTGGTGCGA
CGCTCACATT TCCTGACCAT CATCGCGGCC TGGGTCATCA CCGTCCCCGC TGCCGCGACG
CTCTCTGGGG TGTTGTTCGT GCTGATCAAC CGGATGGTGG GATAA
|
|---|
| Protein sequence | MSQNDLEPRH LETLDRDLDR LSSLEQATAY VGRSNVGLGL AFMFILIVAA ATGLMLGSAD
NTFIIVIAAA FGAYMALNIG ANDVANNMGP AVGANAMSMG FAIVVAAIFE SAGALIAGGD
VVSTIAKGII SPDTMATSSM FIAAMLAALL ASALWVNLAT WIGAPVSTTH AVVGGVMGAG
IAAAGFAAVN WSKMSAIAAS WVISPLLGGL IAAGFLWLIK SRIIYREDKI SAARTWVPIL
VGIMAGAFAS YLAVKGLKKL IKIDLSHSLM IGLVVALLVW MLMIPVIRKQ SKGLENRNKS
LKVLFSIPLI VSAALLSFAH GANDVANAVG PLAAIVQAST SGDFTHAVSI PFWVMIIGAF
GISFGLFLFG PKLIRMVGSQ ITKLNPMRAY CVALSAAITV IVASWLGLPV SSTHIAIGGV
FGVGFFREWD TERRMRKSKA VKADAPNVGP EERRRRKLVR RSHFLTIIAA WVITVPAAAT
LSGVLFVLIN RMVG
|
|---|
| |