| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0580 |
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| Symbol | |
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| ID | 4076145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 618069 |
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| End bp | 619292 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638005877 |
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| Product | hypothetical protein |
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| Protein accession | YP_612575 |
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| Protein GI | 99080421 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.376144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000596414 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCTTTG TCGATCGCCG CATTGAAACC CGCCCGAGCA GCGGCGCAGC CCCTTTCGAA
CTAAACGAGG TCTTTTTCTC GCGTACCGAT GAGCGTGGAG TCATTCTGTC CTGCAACTAC
GTCTTCCAAC GGGTTGCACA TTACGAATGG GAAGAGATTA TCGGAGCGCC CCACAAACTG
GTGCGCCATG CCGACACGCC CAAAGGGTTA TTCTACCTCT TCTGGGAAAT GCTGAAATCC
GGAAAAACCG TTGGTGCATA TGTAAAGAAC AAGTCCAAGG ATGGGCTGCA CTACTGGGTT
TTTGCAACTG TTGTTCCCTG TGGCGACGGC TATCTGTCCG CACGTATAAA GCCAAGCAGC
AAGCTTTTTG CCGAGATCCA GACGCTCTAC GCCAAGATTG TCAAAGCCGA ACAAGAGGGT
GATCTATCCG CCGAGGAAAG CGCTCAGATC ATGCTCGACT GGGTTCACGA AAAGGGCTTT
GACGACTATC AGCATTTTGC ATCGCATGCC CTCGCCGAGG AACTCATTTC GCGCGATTTG
GGCCTGGGTC GCAAGGTGGA TCCGCAGATT TCGGAACTGC GTGAAATGCT GCGCAATGCG
GAAAAGCTTC TCGATGAAAC CCATGGTCTT GTGAAAGACT TCGAAGCCAT GCACACGATT
CCGCATAACC TGCGTGTCAT CGCCTCCCGG ATTGAGCCTT CGGGCGGTCC GGTGACGGTG
CTGTCCCAGA ACTATGGCGC TATGTCGCGC GAAATGTCGG ATTGGTTTGA GCGCAACGTG
ATGGGCGAAA ACACCAACTT TGCCACCGTA AAGCACTCCG TGAACTCCAG CCTCTTTATT
GCGGGCATGA CCCGAATCCT GATGGAATGC GACACCCAGC TGCAAAAGGA ACGGCGTGAT
CTGGGCGATG TCGACATGGA AGAAGAGCGC CGCCGCCTTG CGGATCTGGT CAAACAACAG
GCCGGACACG CCCAGAAAGG CATGGCGGAG GTAGACATCG AAGCCGTGCG GATCATCAAT
GCGTGCCAGG TCATGCATCG TCACTTTCTG GGCCTGAGCT CCACACGCGT CCTCTGTAAA
ATCGAGAGTG CGCGCCTGCC CTCCTCTGGC GAAACCCTTT CTGACATTAT CGATCAGCTT
GGTGCCTTTC AGGAACGCAT TTCGGAACGG TTGGAACATA TCGCAAAACT CGGAGAGGAA
ATTCGCTCGC TCGAGGGCGA GTAA
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| Protein sequence | MSFVDRRIET RPSSGAAPFE LNEVFFSRTD ERGVILSCNY VFQRVAHYEW EEIIGAPHKL
VRHADTPKGL FYLFWEMLKS GKTVGAYVKN KSKDGLHYWV FATVVPCGDG YLSARIKPSS
KLFAEIQTLY AKIVKAEQEG DLSAEESAQI MLDWVHEKGF DDYQHFASHA LAEELISRDL
GLGRKVDPQI SELREMLRNA EKLLDETHGL VKDFEAMHTI PHNLRVIASR IEPSGGPVTV
LSQNYGAMSR EMSDWFERNV MGENTNFATV KHSVNSSLFI AGMTRILMEC DTQLQKERRD
LGDVDMEEER RRLADLVKQQ AGHAQKGMAE VDIEAVRIIN ACQVMHRHFL GLSSTRVLCK
IESARLPSSG ETLSDIIDQL GAFQERISER LEHIAKLGEE IRSLEGE
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