Gene TM1040_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0574 
Symbol 
ID4076139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp612509 
End bp612883 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content58% 
IMG OID638005871 
ProductRNA-binding S4 
Protein accessionYP_612569 
Protein GI99080415 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.75662e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.09736e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCGATC ACGCGGACAA GATGCGGGTC GACAAATGGC TGTGGCACGC GCGGTTTTTC 
AAAACCCGCT CTCTCGCGGC CAAGCAAGTC GGCGCAGGTC ATGTCCGCGT GAATGGCTCC
AAGGCTGCAA AGCCCTCTCA GAACGTCTCC ATTGGGGACG TTTTGACCTT TCCGCAGGGG
CATCAGGTGC GCGTTGTGCG CATCACCTCC CTTTCGGAGC GGCGTGGACC AGCAACCGAG
GCTCAAACGC TGTACTTTGA TATGACGGAG AAGCAGGACA AACCGCCTGC CAATCCCAAA
TACGAAGGAA AAGGTCGCCC GGATAAGAAA GAGCGCAGGG CGCTTGGTCT TACTCGCGTC
TGGGACGGGC ATTGA
 
Protein sequence
MSDHADKMRV DKWLWHARFF KTRSLAAKQV GAGHVRVNGS KAAKPSQNVS IGDVLTFPQG 
HQVRVVRITS LSERRGPATE AQTLYFDMTE KQDKPPANPK YEGKGRPDKK ERRALGLTRV
WDGH