| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0552 |
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| Symbol | |
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| ID | 4077903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 588982 |
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| End bp | 590268 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005849 |
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| Product | diaminobutyrate--2-oxoglutarate aminotransferase |
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| Protein accession | YP_612547 |
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| Protein GI | 99080393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases
[TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAG ACATGGCAAC CGATACGTCT ATCTATACGC GCCGCGAAAG TAATGCGCGC
TCCTACTGCC GCTCCTTCAC AGCGTCGTTT GACACCGCAC GCGGCTCCGA GCTGTTTACT
GAAGACGGCA CCCGCTACAT CGACTTTCTG GCGGGCTGCT CCTCGCTCAA CTACGGCCAC
AATGACCCCG ACATGAAGGA TGCGCTGGTT GCGCATATCC TGAAGGACGG CATCACCCAT
GGCCTCGACT TTCATACCGA AGCCAAGGAA GCCTTCCTGC ACAGCTTCAC CGATTTGATC
TTGGCGCCCC GTGGCATGGA TCATAAGGTC ATGTTTACCG GCCCGACGGG CGCGAACGCT
GTTGAGGCAG CGATGAAGAT CGCCCGCAAG GTGACCGGCC GGACCAATGT GATTTCCTTC
ACCAACGGGT TTCATGGCGT GACCATGGGG GCGCTGGCCG CGACTGGTAA CGGCTATCAC
CGCGGTGGGG CAGGCATGGA CAAGGCGGGT GTGACCCGCA TGCCGTATGA TGCCTATGTC
GATGGTGTCG ACAGTGCAGC GCTTCTGGAC AAGATGCTGT CTGATCCGTC GGGCGGGATC
GACGCGCCTG CTGCAATCAT GCTGGAACCG GTGCAGGGCG AAGGCGGTCT GAACGCCGCT
TCGGCTGGTT TTGTGAAGAA AGTTCAAGAG ATTGCCCATA AGCACGGCGC GCTGTTGATC
ATCGACGACA TTCAGTCCGG GTGTGGTCGC ACAGGCACGT TCTTCTCTTT TGAAGACATG
GGCGTTCAGC CTGACGTCGT GACCATGGCG AAATCGGTCT CGGGTTTTGG CCTGCCGATG
GCGATGGTTC TGGTGCGTCC GCAGCATGAC GTCTTTGGCC CTGCCGAGCA CAACGGGACC
TTCCGTGGCA ACACCCATGC CTTTGTGACC GCCCGTGTCG CGATCGAGAA ATTCTGGGCC
GATGATGCGT TCCAGACTGA GCTTGCCCGC AAGTCGGAGC TGGTGACGAG CGCGCTGCAG
GAAGTGGCAA GCCACATTCC AGGAGCCTAC CTCAAGGGTC GTGGCCTCAT GCAAGGTGTC
GACGTGGGCT CTGGCGAGCT GGCCGGGGAC ATCTGTGCCC GTGCCTACGA GCTGGGTCTC
GTGGTCGAGA CCTCTGGCCC CAACGATGAG GTGGTCAAGA TCCTCGCACC GCTCACCACA
TCCGAGCAGC TGCTTTGCGA AGGCTTCGCC ATCCTGAGCA CTGCGGCCCG CGAAGTGGCT
GCAAAAACCA AAATTGCCGC GCAATAA
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| Protein sequence | MPKDMATDTS IYTRRESNAR SYCRSFTASF DTARGSELFT EDGTRYIDFL AGCSSLNYGH
NDPDMKDALV AHILKDGITH GLDFHTEAKE AFLHSFTDLI LAPRGMDHKV MFTGPTGANA
VEAAMKIARK VTGRTNVISF TNGFHGVTMG ALAATGNGYH RGGAGMDKAG VTRMPYDAYV
DGVDSAALLD KMLSDPSGGI DAPAAIMLEP VQGEGGLNAA SAGFVKKVQE IAHKHGALLI
IDDIQSGCGR TGTFFSFEDM GVQPDVVTMA KSVSGFGLPM AMVLVRPQHD VFGPAEHNGT
FRGNTHAFVT ARVAIEKFWA DDAFQTELAR KSELVTSALQ EVASHIPGAY LKGRGLMQGV
DVGSGELAGD ICARAYELGL VVETSGPNDE VVKILAPLTT SEQLLCEGFA ILSTAAREVA
AKTKIAAQ
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