Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0443 |
Symbol | |
ID | 4076086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 459119 |
End bp | 460147 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005739 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_612438 |
Protein GI | 99080284 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAA CCAGCTTCAC CCCGCGTGTC TTTTCAGGCA TCCAGCCTTC GGGCAATCTG CATCTGGGGA ATTACCTCGG TGCATTGAAG CGGTTCGTCG ACTGGCAATC GCGGGACGTG GAGTCGATCT ACTGCATGGT TGACCTTCAT GCGATCACCG TCTGGCAAGA CCCGGCAGAC CTGAAGAAGG CCACGCGTGA GCTGTGCGCA GGCTTCATTG CCGCGGGGCT TGATCCGGAA AAATCCATCC TGATCAATCA GAGCCAGGTG CCGGAGCACG CGCAGCTTGC ATGGATCTTC AACTGCGTCG CCCGCATGGG GTGGATGCAG CGGATGACCC AGTGGAAGGA TAAGGCAGGT AAAAACCAGC AAAACGCCTC GCTGGGTCTG TTGGCCTATC CGTCCCTGAT GGCCGCCGAT ATCCTGATCT ACCACGCCAC CCATGTGCCG GTGGGCGAGG ACCAGAAACA GCACCTCGAG CTTACCCGCG ACATCGCGAC CAAGTTCAAC CACGACTATG GCGTTGACTT CTTCCCGCTG ACCGAGCCGG TGATCGAAGG CGCGGCCACC CGTGTCATGA GCCTGCGTGA TGGCTCCAAG AAGATGTCGA AATCCGACCC TTCTGATGCG AGCCGGATCA ATCTCACCGA TGATGCGGAC ACCATCGCCA AGAAAATCCG CAAGGCCAAG ACCGATCCCG AGGCCCTGCC CTCCGAGGCC AAAGGGCTTG AAGAGCGCCC CGAGGCACGC AACCTTGTGA ACATCTACGC GGCGATGGCC GATCAGACGG TGGATCAGGT TCTTGCAGAT GTGGGTGGCA AACAGTTCTC GGAATTCAAG CCGATGCTGG CCGATCTCGC GGTCGAGCGT ATGGCGCCGA TCACCACCGA GATGGCCCGT CTGATGGAAA ACCAGGACGA GATCGACAAG ATCCTCGCAC GGGGATCAGA GCGTGCGCGC GCAATCACTG CACCGATCCT GCGTAAGACC TACGACATTG TGGGCATGGT CGCCCCGGTC GAGATTTGA
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Protein sequence | MSETSFTPRV FSGIQPSGNL HLGNYLGALK RFVDWQSRDV ESIYCMVDLH AITVWQDPAD LKKATRELCA GFIAAGLDPE KSILINQSQV PEHAQLAWIF NCVARMGWMQ RMTQWKDKAG KNQQNASLGL LAYPSLMAAD ILIYHATHVP VGEDQKQHLE LTRDIATKFN HDYGVDFFPL TEPVIEGAAT RVMSLRDGSK KMSKSDPSDA SRINLTDDAD TIAKKIRKAK TDPEALPSEA KGLEERPEAR NLVNIYAAMA DQTVDQVLAD VGGKQFSEFK PMLADLAVER MAPITTEMAR LMENQDEIDK ILARGSERAR AITAPILRKT YDIVGMVAPV EI
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