| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0413 |
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| Symbol | |
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| ID | 4076173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 423335 |
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| End bp | 424114 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005708 |
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| Product | hypothetical protein |
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| Protein accession | YP_612408 |
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| Protein GI | 99080254 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3496] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00475452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.256697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA GCGCGCCCAT ATCCCCCCTG GTAAAAGGGC CGCTGCATCT GGCAGGCACC
ACCACCCACG CCAGACGCGG CGCCATCCAG AACGCGTTTC GATATGGCGT GGACTATGTT
CTGATTGATC CGCAATCGAC CCGCGGCCCG TTGCTCTTTT CGCGCAACCG CTGGAACCTT
GCCTCTGTCA TGGATCGAAA CCACGGTGGC GCCCCCAAAA AAGGACGCGG TCTGGATTGG
GCGAAAGAGG TGTTCGAACA CGCGGGCCTT GCCCCTCAAA ACCTCCGGAT CCTGTTGCTC
ACTCAGCCGA GCTTTCTGGG TTACATCTTC AACCCGGTGA GCTTCTGGCT CGCATACGAC
GGAGCGACCC TCAGGGGCGT GATCGCCGAG GTGTCAAACA CCTTTGGCGA CCGTCACAGC
TATCTTTGTG CTGAGCCTGA ATTTGCACCG ATTACCGCAA AATCCTGCCT GAGTGCGCAG
AAAATCTTTC ACGTCTCCCC CTTTCAGGAG GTCGCGGGCG ACTATCGATT TACCTTTGAT
ATAACAGGGA CTCGGATCGC GATCCGCATC GCCCACAAAA ACGGCTCCGA AGGCGTCATC
GCAACCCTGA TGGGCGAATT GCACGACTTG AATAACGCCC GCCTGATCAA AGCCAGCCTG
CGTCGCCCGT TTGGGGCCAT GCGCACGGTC GCCTTGATCT ACTGGCAGGC GCTGAAACTC
AAACTCAAGG GCGCCCGGTA TCGAAGACGC CCGCTCCCGC CCGAACAGGA GGTCAGCTGA
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| Protein sequence | MSASAPISPL VKGPLHLAGT TTHARRGAIQ NAFRYGVDYV LIDPQSTRGP LLFSRNRWNL
ASVMDRNHGG APKKGRGLDW AKEVFEHAGL APQNLRILLL TQPSFLGYIF NPVSFWLAYD
GATLRGVIAE VSNTFGDRHS YLCAEPEFAP ITAKSCLSAQ KIFHVSPFQE VAGDYRFTFD
ITGTRIAIRI AHKNGSEGVI ATLMGELHDL NNARLIKASL RRPFGAMRTV ALIYWQALKL
KLKGARYRRR PLPPEQEVS
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