| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0396 |
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| Symbol | |
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| ID | 4078790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 404143 |
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| End bp | 406101 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005691 |
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| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
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| Protein accession | YP_612391 |
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| Protein GI | 99080237 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.599531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC ACCCGATATT GTGTGATTGT TCCGGTTCCC AACCGCTCGA TTCAGAGGCG
CTCAGCGCGG CCACCGGCCT GCCCTGTTCG AAGGTACATT CACACCTCTG CACAACCGAG
TCAGAGGCCG CTGCGGCCGC CCTTCAGGAC CCGGATGCAA TTTTTTGTTG CGGGCAGGAA
AGTCGGTTTT TCACCGCCCT TGCCGAGGAG CTGGGCCAAG ATGCCCCCGC CTTCCTGGAC
CTGCGAGACC GTGCCGGATG GTCCCGTGAC GCCCTGAAGG CAGCCGATGT ACTACCCAAA
ATGTCCGCAT TGGTGTCAGA GGCCCAATTG GACCTGCGCC CTGCCAAAAG CGTCGATGTG
GTAAGCGAGG GTCTGTGCCT CATCGTGGGA ACTGCGGACG CGGCGCTCCC GGCAGCAGAA
AAACTGCAAG ACAGTCTTGG CGTCACCGTC CTGCTGACCG ATGCTGCAGA ACCGCCCCTC
AGCCGAGGCT TTGACACGAT CCGCGGCCAG TTGCGCAGCG CGCAAGGGGC GCTTGGCGGT
TTTGAGATCA CGGTAGACGC GCTGCAATCG CTTGATGTGA CCGGGCGAGA ATGGTCTTGG
AGCGCACCGC GTGACGGCGG CCGTTCAGAG TGCGACATCA TCCTCGATCT GCGCGGCGGC
ACGCCCCTGT TCCCCGCGCC TGAAAAGCGC GAAGGCTATC TGCGTGCAGA TCCCAAATCG
CCTGTGGCGG TGGCGGATGC GGTGTTTGCC GCAAGCCAGT TGGTGGGCAC CTTCGAAAAG
CCGCTCTATG TCAAAGCCGA GCCACTTCTC TGTGCGCATT CCCGCGCCCG CCAGACCGGC
TGCACGCGCT GTCTCGATGC CTGCCCCACC GGTGCCATCA CCCCCAATGG GGACAGCGTT
GCCATTGATC CGATGATCTG TGCTGGCTGC GGGGCCTGCG CCTCGCTCTG CCCCTCGGGC
GCGATCACCT ATGACGCGCC ACCCACCGAG AGCCTGTTCC TGCGGATCCA GACCCTTGCC
AAAGCCTATC TCGACGCGGG GGGCGAAGCC CCGCGCCTGC TGGTCGTTGA TGCGCATGGA
GCCGAGATGA TCCGCCTCGC GGCACGGTTT GATCGCGGTC TGCCTGCAGC TGTCATTCCA
CTCGAAGTCG AAGCCTTCAA CACTTTTGGC CATGCCGAAA TTCTCGCGGC ACGCGCAGCT
GGTTTTCGCG AAGTGTGCCT CTTGCCCGGC CCCCGCGCCG ATCTCGATGT GCAAACACGT
GAACGGGAGC TGGCCAATGC AATCTCGGCC GACGCGGCTC GCCTGCTGCA CGCCGCCGAA
CCCGAAGCCC TCTGCGATGC GCTTTATGAG GCGCGCACCC TGCCCGCCGC GCCGGAGACA
CCACAGCGCC CCATGGGCAC CCGCCGACAG ATCACCCGTC AGGCAGCCCT GGCCTTGACC
GCGGCTGACA CCGAGCTGCC GTTGCCCGAG GGCGCGCCTT ATGGTGCCGT GGTTGTGGAC
ACTGACGCCT GTACGCTGTG CCTGTCATGT GTTTCGCTAT GCCCCTCCGG TGCGCTTGGC
GACAACGAAG ATCTGCCACA GCTGCGTTTT CAAGAGGACG CCTGCCTGCA ATGCGGTCTC
TGTGCCAATG CCTGTCCGGA GGATGCAATC ACATTTGCGC CCCGCCTGAA CCTCGCCCCA
TCGGCGCTGG ATCAAATAGT ACTGAACGAA GAAGAGCCCT TTGCCTGCAT CGAATGCGGC
AGCCTCTTTG GGGTCAAATC CACAGTCGAA CGGATCATGG AGAAGCTTGC GGGCAATCAC
GCGATGTTTG CGAGCTCCGA GGCCGCCAAG ATGATCCAGA TGTGTGATGA TTGCCGGGTA
AATGCGCAGT TCCACCAGAA GGACTCGCCC TTTGCGAGCA AGGAACGCCC GCGCGTCCGC
ACCACGGAAG ACTATCTCAG CACGCGCCGT GATCATTAA
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| Protein sequence | MPKHPILCDC SGSQPLDSEA LSAATGLPCS KVHSHLCTTE SEAAAAALQD PDAIFCCGQE
SRFFTALAEE LGQDAPAFLD LRDRAGWSRD ALKAADVLPK MSALVSEAQL DLRPAKSVDV
VSEGLCLIVG TADAALPAAE KLQDSLGVTV LLTDAAEPPL SRGFDTIRGQ LRSAQGALGG
FEITVDALQS LDVTGREWSW SAPRDGGRSE CDIILDLRGG TPLFPAPEKR EGYLRADPKS
PVAVADAVFA ASQLVGTFEK PLYVKAEPLL CAHSRARQTG CTRCLDACPT GAITPNGDSV
AIDPMICAGC GACASLCPSG AITYDAPPTE SLFLRIQTLA KAYLDAGGEA PRLLVVDAHG
AEMIRLAARF DRGLPAAVIP LEVEAFNTFG HAEILAARAA GFREVCLLPG PRADLDVQTR
ERELANAISA DAARLLHAAE PEALCDALYE ARTLPAAPET PQRPMGTRRQ ITRQAALALT
AADTELPLPE GAPYGAVVVD TDACTLCLSC VSLCPSGALG DNEDLPQLRF QEDACLQCGL
CANACPEDAI TFAPRLNLAP SALDQIVLNE EEPFACIECG SLFGVKSTVE RIMEKLAGNH
AMFASSEAAK MIQMCDDCRV NAQFHQKDSP FASKERPRVR TTEDYLSTRR DH
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