| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0345 |
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| Symbol | |
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| ID | 4076046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 351754 |
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| End bp | 352602 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005640 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_612340 |
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| Protein GI | 99080186 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCACC TTCTCTTGGT CGCGACGGCC ACCGCCAGCC TGATGACGGC ACCGGTGGCG
CAGGCCGCAG ACCGGATCCT CTCGATCGGA GGCTCCGTTA CGGAAATCAT CTATGCCCTT
GGTGCAGAGG ACAAAATTGT CGCCCGCGAC ACCACATCAA GCTATCCAGC AGAGGCCGAG
GCCCTGCCCG ATGTGGGCTA TATGCGCGCC CTTGCACCCG AGGGGGTGCT ATCCGTGAAC
CCAAACCTGA TCGTCTCCGA GGCGGGCGCA GGCCCGGCAG AAACGCTGGC AGTCCTGAAA
CAGGCCGACA TCACCTTTGT CGAAGTGCCG GATGACTTCA GTGCCCAAGG CATCGTCGAC
AAGATCAACG CCGTGGGTGC GGCCATTGGC GAACCCGACG CGGCCGCAAC CCTCGCCGAC
AAAGTAGAGG GCGAACTGGT AGCAGTGGCC GAGCGCGTCG CACGCCTTCC CGACAGCGAG
CGCAAACGCG TCTTGTTTGT CCTTTCCACG CGTGGCGGTC GCATCATGGC CTCGGGGACA
AATACAGCCG CCGATGGCAT CATCGCCCTC GCGGGGGGCG TCAACGCGCT GTCGGAGTTT
GAGGGCTACA AGCTCATGAC CGACGAGGCC GTGACCCGCG CGCAGCCGGA TGTGATCCTG
ATGATGGATC GCGGCGGCGA CCACGGCATG CCCGACGAGA CACTTCTCGC GCTGCCCGCC
ATCGTCACCA CCCCCGCGGC CGAGACGGGC TCCGTTGTGC GCATGAATGG CCTCTATCTA
CTGGGGTTTG GTCCGCGGAC AGCGGATGCG GCGCTGACAC TCGCCCGCGC TTTATATGGT
GAGATCTGA
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| Protein sequence | MRHLLLVATA TASLMTAPVA QAADRILSIG GSVTEIIYAL GAEDKIVARD TTSSYPAEAE
ALPDVGYMRA LAPEGVLSVN PNLIVSEAGA GPAETLAVLK QADITFVEVP DDFSAQGIVD
KINAVGAAIG EPDAAATLAD KVEGELVAVA ERVARLPDSE RKRVLFVLST RGGRIMASGT
NTAADGIIAL AGGVNALSEF EGYKLMTDEA VTRAQPDVIL MMDRGGDHGM PDETLLALPA
IVTTPAAETG SVVRMNGLYL LGFGPRTADA ALTLARALYG EI
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