Gene TM1040_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0343 
SymbolhmuV 
ID4076044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp349883 
End bp350665 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID638005638 
Producthemin importer ATP-binding subunit 
Protein accessionYP_612338 
Protein GI99080184 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4559] ABC-type hemin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC ATGCACAGCA GATTTCCCTC TCGATCGGCA AAAAGCAGAT CCTGAAGGAT 
GTGACGTTCG CGGCACGCGC TGGGGCGCTC TCCGCGATCG TGGGACCAAA TGGCTCCGGC
AAGTCCACCT TGCTCAAGGC CTTGGTTGCA GAGCTGCCGT CAGAGGGACA GATCTCCCTC
AACGGGCGGC TGTTGCAGGA CTACGCCGCC TGGGAGCTGG CAAGCCTGCG CGGGGTGTTG
CCACAGGCCG CCCATCTCGC CTTTCCGTTC ACGGTGCTGG AGGTAGTGCG ACTGGGGCTG
ATGGCCGGGC CTGAGGCACA GAACACGCGG CTTCCCTTTG AGGCACTGGC CCGCGTGGAC
CTTGAGGGCT ATGCCGGGCG CTCCTATCAG GAACTCTCCG GAGGCGAACA ACAGCGGGTC
CAGCTGGCGC GGGTTCTGGC GCAGGTCGGC GCTCCGATGC GGGAGGGGCA ACCTTGCTGG
TTGTTTCTGG ACGAGCCTGT CTCCAGTCTC GACATCGCCC ATCAGCTGAC GGTGATGGAT
ATCGCGCGCC AGTTTGCGGA TGGCGGTGGC GGGGTGGTTG CGGTGATGCA CGACCTGAAC
CTCACCGCGA TGTATGCCGA TCACGTGCAT GTCATGACCG GCGGAGAGAC CGCAGGTGCC
GGAACAGTGG CGGACGTTCT GACCGATCAA CGCCTGTCAG AGGTCTACGG ATGCGACCTG
CGCATCGGAA AAGTGCCCGC AGATGCCGCC GTCTTTGTTC TGCCGCAAAC GGCGCGGGCA
TGA
 
Protein sequence
MTLHAQQISL SIGKKQILKD VTFAARAGAL SAIVGPNGSG KSTLLKALVA ELPSEGQISL 
NGRLLQDYAA WELASLRGVL PQAAHLAFPF TVLEVVRLGL MAGPEAQNTR LPFEALARVD
LEGYAGRSYQ ELSGGEQQRV QLARVLAQVG APMREGQPCW LFLDEPVSSL DIAHQLTVMD
IARQFADGGG GVVAVMHDLN LTAMYADHVH VMTGGETAGA GTVADVLTDQ RLSEVYGCDL
RIGKVPADAA VFVLPQTARA