Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0343 |
Symbol | hmuV |
ID | 4076044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 349883 |
End bp | 350665 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638005638 |
Product | hemin importer ATP-binding subunit |
Protein accession | YP_612338 |
Protein GI | 99080184 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4559] ABC-type hemin transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTTGC ATGCACAGCA GATTTCCCTC TCGATCGGCA AAAAGCAGAT CCTGAAGGAT GTGACGTTCG CGGCACGCGC TGGGGCGCTC TCCGCGATCG TGGGACCAAA TGGCTCCGGC AAGTCCACCT TGCTCAAGGC CTTGGTTGCA GAGCTGCCGT CAGAGGGACA GATCTCCCTC AACGGGCGGC TGTTGCAGGA CTACGCCGCC TGGGAGCTGG CAAGCCTGCG CGGGGTGTTG CCACAGGCCG CCCATCTCGC CTTTCCGTTC ACGGTGCTGG AGGTAGTGCG ACTGGGGCTG ATGGCCGGGC CTGAGGCACA GAACACGCGG CTTCCCTTTG AGGCACTGGC CCGCGTGGAC CTTGAGGGCT ATGCCGGGCG CTCCTATCAG GAACTCTCCG GAGGCGAACA ACAGCGGGTC CAGCTGGCGC GGGTTCTGGC GCAGGTCGGC GCTCCGATGC GGGAGGGGCA ACCTTGCTGG TTGTTTCTGG ACGAGCCTGT CTCCAGTCTC GACATCGCCC ATCAGCTGAC GGTGATGGAT ATCGCGCGCC AGTTTGCGGA TGGCGGTGGC GGGGTGGTTG CGGTGATGCA CGACCTGAAC CTCACCGCGA TGTATGCCGA TCACGTGCAT GTCATGACCG GCGGAGAGAC CGCAGGTGCC GGAACAGTGG CGGACGTTCT GACCGATCAA CGCCTGTCAG AGGTCTACGG ATGCGACCTG CGCATCGGAA AAGTGCCCGC AGATGCCGCC GTCTTTGTTC TGCCGCAAAC GGCGCGGGCA TGA
|
Protein sequence | MTLHAQQISL SIGKKQILKD VTFAARAGAL SAIVGPNGSG KSTLLKALVA ELPSEGQISL NGRLLQDYAA WELASLRGVL PQAAHLAFPF TVLEVVRLGL MAGPEAQNTR LPFEALARVD LEGYAGRSYQ ELSGGEQQRV QLARVLAQVG APMREGQPCW LFLDEPVSSL DIAHQLTVMD IARQFADGGG GVVAVMHDLN LTAMYADHVH VMTGGETAGA GTVADVLTDQ RLSEVYGCDL RIGKVPADAA VFVLPQTARA
|
| |