Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0321 |
Symbol | |
ID | 4076217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 326224 |
End bp | 326781 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638005616 |
Product | redoxin |
Protein accession | YP_612316 |
Protein GI | 99080162 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCG ACACGCCCCT TTGTTCCTTC GGCTGGAAGG CACCTGATTT CACGCTGCGC GATCCCGAGG GTCGCCCCTA TACGATGTCC GATCATCTCG GCGAGAAGGG GCTGCTTGTG GCCTTTCTCT GCAACCACTG CCCCTATGTG CAGGCGGTTG CCGACCGGCT GGCAGAGGAT ACTGGTACTT TGTTGGACGA GGGCATTGGC GTGCTGGCGG TCATGTCGAA CGACTATCAC GCGGTGCCGA TGGACCATCC GGCCTATATG CAGCGGTTTG CGCGCGAAGT GGGCTGGCGT TTTCCCTATC TCGTTGATGA GGATCAGTCG GTTGGGCAGG CTTGGGGCGC GGTTTGCACG CCGGACTTCT TTGGCCTCAA TGCCGCGGGC GCGTTGCAAT ATCGCGGTCG TCTGGACAAC GCCCGTTTTG ATGCGCCTGC AGGTCGCAAC CGCGAGCTGG TCGCGGCCAT GCGGCAGATC GCGATGACGG GTGAGGGGCC ACAAGAACAG TTGTCGTCGA TGGGATGTTC GATCAAATGG CGCAGCGCCA GAGGTTGA
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Protein sequence | MLRDTPLCSF GWKAPDFTLR DPEGRPYTMS DHLGEKGLLV AFLCNHCPYV QAVADRLAED TGTLLDEGIG VLAVMSNDYH AVPMDHPAYM QRFAREVGWR FPYLVDEDQS VGQAWGAVCT PDFFGLNAAG ALQYRGRLDN ARFDAPAGRN RELVAAMRQI AMTGEGPQEQ LSSMGCSIKW RSARG
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