| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0271 |
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| Symbol | rpsE |
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| ID | 4077679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 279375 |
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| End bp | 279938 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005565 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_612266 |
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| Protein GI | 99080112 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0228264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.455231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAC GTGAAAACCG CCGCGGCAAC CGCCGCGACC GTGAAGAGAC ACCGGAATTC
GCAGATCGTC TGGTCGCGAT CAACCGCGTG TCCAAAACCG TTAAGGGTGG TAAGCGCTTC
GGCTTCGCCG CGCTCGTCGT CGTAGGTGAC CAAAAAGGTC GCGTCGGCTT CGGCAAAGGT
AAAGCCAAAG AGGTGCCCGA GGCGATCCGC AAGGCAACCG AGCAAGCCAA GCGCCAGATG
ATCCGCGTGC CGCTGAAAGA GGGTCGTACC CTGCACCACG ACATGTACGG TCGCCACGGC
GCCGGCAAAG TGGTCATGCG CACCGCTCCG GAAGGTACTG GTATCATCGC CGGTGGTCCG
ATGCGTGCTG TGTTTGAAAT GCTGGGCATC AAGGACGTGG TTTCCAAGTC CGTTGGCTCT
CAGAACCCTT ACAACATGAT CCGCGCCACC ATCGACGGCC TGAAAAAAGA GCAGAGCCCG
CGCTCTGTTG CTCAGCGTCG TGGCAAAAAG GTTGCTGACA TCCTGCCCAA GCGGGACGAA
GCACCCGCGG AAGCAGAAGC GTAA
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| Protein sequence | MAERENRRGN RRDREETPEF ADRLVAINRV SKTVKGGKRF GFAALVVVGD QKGRVGFGKG
KAKEVPEAIR KATEQAKRQM IRVPLKEGRT LHHDMYGRHG AGKVVMRTAP EGTGIIAGGP
MRAVFEMLGI KDVVSKSVGS QNPYNMIRAT IDGLKKEQSP RSVAQRRGKK VADILPKRDE
APAEAEA
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