| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0268 |
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| Symbol | rpsH |
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| ID | 4077676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 277895 |
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| End bp | 278287 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005562 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_612263 |
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| Protein GI | 99080109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0501606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.446671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGATC CTATCGGCGA TATGCTCACC CGTATCCGTA ACTCTCAGAT GCGTGGCAAA
TCCACCGTCA TGACCCCGGC GTCCAAACTG CGCGCATGGG TTCTGGATGT GCTGCAGTCC
GAGGGCTACA TCCGCGGCTA CGAGAGCGCG ACTGATGAAC GCGGCCACCC GGCGCTGGAA
ATCAGCCTCA AGTACTACGA AGGCGAACCT GTCATTCGCG AACTGAAGCG GGTCTCCAAA
CCCGGTCGTC GCGTTTACAT GGGCGTCAAT GACATCCCGT CGGTCCGTCA GGGCCTGGGT
GTGTCGATTG TCTCCACCCC CAAAGGTGTG ATGTCGGATG CAAACGCACG CGCGGCCAAC
GTTGGTGGCG AAGTGCTTTG CACCGTCTTC TAA
|
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| Protein sequence | MNDPIGDMLT RIRNSQMRGK STVMTPASKL RAWVLDVLQS EGYIRGYESA TDERGHPALE
ISLKYYEGEP VIRELKRVSK PGRRVYMGVN DIPSVRQGLG VSIVSTPKGV MSDANARAAN
VGGEVLCTVF
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