Gene TM1040_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0262 
Symbol 
ID4077670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp275778 
End bp275978 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content54% 
IMG OID638005556 
Product50S ribosomal protein L29 
Protein accessionYP_612257 
Protein GI99080103 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0255] Ribosomal protein L29 
TIGRFAM ID[TIGR00012] ribosomal protein L29 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.582427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.636432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA AGGATCTGCG CGACAAAACC GTGGACGAGC TCCGCGACGA ACTCGCAAAC 
CTCAAAAAAG AGAGCTTCAA CCTGCGCTTT CAACAAGCGA CCGGTCAGCT GGAAAACACT
GCAGGCATCA AAGCGGCTCG CCGCAACGCT GCTCGCGTGA AAACCATCCT GAACGAAAAA
GCTGCAGCAG CAGCTGAATA A
 
Protein sequence
MNAKDLRDKT VDELRDELAN LKKESFNLRF QQATGQLENT AGIKAARRNA ARVKTILNEK 
AAAAAE