| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0206 |
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| Symbol | |
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| ID | 4078654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 223721 |
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| End bp | 224980 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005500 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_612201 |
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| Protein GI | 99080047 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.475237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAG ATCTCATCAA TAGCTTCATG AACGGGCCGG ACGAAAACGG TCGGTTTGGC
ATCTTTGGCG GCCGCTTTGT CAGCGAGACA CTGATGCCGC TGATCCTGAG CCTCGAAGAG
GAATACGAAA AGGCCAAGGT GGATCCGGAT TTCTGGGCGG AAATGGATGA TCTGTGGAAG
AACTATGTGG GCCGCCCGAG CCCGCTCTAT TTCGCCGAGC GCCTGACCAA TCATCTGGGC
GGCGCCAAGG TCTACATGAA GCGTGACGAG CTCAATCACA CCGGCGCGCA TAAAGTGAAC
AATGTGCTGG GTCAGATCCT GCTCGCCCGC CGCATGGGCA AGACTAGGAT CATCGCCGAA
ACCGGTGCTG GCCAGCATGG GGTTGCGACC GCCACTGTCT GTGCCAAGTT TGGTCTGAAA
TGCGTGGTCT ACATGGGCGC TCATGACGTA CGTCGACAGG CGCCCAACGT GTTCCGGATG
CGTCTTCTTG GCGCTGAGGT GATCCCAGTC ACCTCTGGCC GTGGCACGCT CAAGGATGCG
ATGAACGACG CGCTGCGGGA CTGGGTCACC AATGTGCGCG ACACATTCTA CTGCATCGGC
ACCGTTGCGG GCCCGCACCC CTATCCGGCT ATGGTGCGCG ATTTCCAGTC CGTGATCGGC
AAGGAAGTGC GCTGGCAGCT TGCAGAGCAG GAAGGCGAGG GCCGGTTGCC GGACACGGTG
ATTGCGGCTA TCGGAGGGGG CTCCAACGCG ATGGGCCTGT TCCACCCGTT CCTCGATGAC
CCTTCGGTCA ATATCATTGG CGTTGAGGCC GGCGGCAAAG GTGTGGATGA GAAAATGGAG
CATTGCGCCT CATTGACAGG CGGCCGGCCG GGCGTGCTGC ACGGCAACCG GACCTATCTG
CTGCAGGACG ATGACGGCCA AATCCTCGAA GGCTTCTCGA TTTCGGCGGG CCTGGATTAC
CCGGGGATCG GGCCGGAGCA TGCCTGGCTG CATGAGACCG GGCGCGCGCA ATACGTGTCC
ATCACCGACA AGGAAGCCCT CGAGGCGTTC CAGCTGTCCT GCGCGATGGA GGGGATTATC
CCGGCGCTCG AGCCGAGCCA CGCGCTCGCT CATGTCACTA AGATCGCACC AGAACTGCCC
AAGGACCACA TCATCGTGAT GAACATGTGT GGGCGTGGCG ACAAGGACAT CTTTACCGTA
GCCCGCCACC TCGGGTTTGA TATGTCAGAC ACCGAAGAGG GCCGCGACCT CGAAGAGTGA
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| Protein sequence | MAEDLINSFM NGPDENGRFG IFGGRFVSET LMPLILSLEE EYEKAKVDPD FWAEMDDLWK
NYVGRPSPLY FAERLTNHLG GAKVYMKRDE LNHTGAHKVN NVLGQILLAR RMGKTRIIAE
TGAGQHGVAT ATVCAKFGLK CVVYMGAHDV RRQAPNVFRM RLLGAEVIPV TSGRGTLKDA
MNDALRDWVT NVRDTFYCIG TVAGPHPYPA MVRDFQSVIG KEVRWQLAEQ EGEGRLPDTV
IAAIGGGSNA MGLFHPFLDD PSVNIIGVEA GGKGVDEKME HCASLTGGRP GVLHGNRTYL
LQDDDGQILE GFSISAGLDY PGIGPEHAWL HETGRAQYVS ITDKEALEAF QLSCAMEGII
PALEPSHALA HVTKIAPELP KDHIIVMNMC GRGDKDIFTV ARHLGFDMSD TEEGRDLEE
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