Gene TM1040_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0204 
Symbol 
ID4078652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp221741 
End bp222388 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID638005498 
ProductN-(5'-phosphoribosyl)anthranilate isomerase 
Protein accessionYP_612199 
Protein GI99080045 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.598443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA TTCGGGTCAA GATTTGCGGC ATGAAGACGC GCGCCGACAT GGAGGCTGCG 
GCAGCTGCAG GCGCGGCCTA TGTGGGTCTG AATTTCTACG CCAAATCAGC ACGTTCCGTC
ACGATTGCTC AAGCTGCCGC ACTTGCTTCA GACGCGCCTG TGGGACTTGC GAAGGTGGGG
CTCGTCGTCA ACCCCACCGA TGCAGATCTC GATGCGATTA CCGGATCCGT CCCGCTCGAT
ATGATTCAGC TTCACGGTCA GGAGAGCGTG GAGCGCGTGG CCGAAATCAA GACACGCTAC
GGGTTGCCCG TCATGAAGGT GATCGGCGTC GCCGAGGCCG CAGATCTGGA TCCCATTGAT
CTCTACGCGC AAGTTGCCGA TCAACTGATG GTCGATGCCA AGGCCCCGAA AGGGGCGAAA
CTCCCCGGTG GAAATGGGAT CTCCTTTGAC TGGCAGTTGC TGGCCAGTAA AAAATACTGG
CAGGCACCTT GGATGTTGGC TGGTGGTCTG ACGCCTGAGA ATGTCGCTGA GGCGATCCGG
AAAACCGGCG CGCGCCAGGT GGATGTCGCC TCTGGCGTTG AGAGCGCTCC GGCACAGAAA
GATCCGGATC TGATGCGCGC CTTTGTCGAG GCCGCGCAAG CCGTCTGA
 
Protein sequence
MADIRVKICG MKTRADMEAA AAAGAAYVGL NFYAKSARSV TIAQAAALAS DAPVGLAKVG 
LVVNPTDADL DAITGSVPLD MIQLHGQESV ERVAEIKTRY GLPVMKVIGV AEAADLDPID
LYAQVADQLM VDAKAPKGAK LPGGNGISFD WQLLASKKYW QAPWMLAGGL TPENVAEAIR
KTGARQVDVA SGVESAPAQK DPDLMRAFVE AAQAV