| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0202 |
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| Symbol | ihfB |
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| ID | 4078650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 221101 |
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| End bp | 221388 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638005496 |
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| Product | integration host factor subunit beta |
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| Protein accession | YP_612197 |
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| Protein GI | 99080043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.857447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCGTT CGGAACTGAT TCAGAAGATT GCAGACGAAA ACCCGCACCT GTACCAGCGG
GATGTGGAGC GGATCGTCAA CACGGTCTTT GAGGAAGTCA CCAATGCCAT GTCGCGCGGC
GACCGGGTGG AGCTGCGTGG CTTTGGGGCA TTTTCGGTGA AGAAACGTGA TGCGCGCGTC
GGGCGCAACC CGCGCACCGG CGAGACGGTG CATGTTGAAG AAAAGCATGT GCCTTTCTTC
AAGACGGGTA AGCTTCTGCG CGACAGGTTG AACGGAAAAG AAGAGTAA
|
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| Protein sequence | MIRSELIQKI ADENPHLYQR DVERIVNTVF EEVTNAMSRG DRVELRGFGA FSVKKRDARV
GRNPRTGETV HVEEKHVPFF KTGKLLRDRL NGKEE
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