| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0190 |
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| Symbol | |
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| ID | 4078422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 208272 |
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| End bp | 208856 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638005484 |
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| Product | hypothetical protein |
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| Protein accession | YP_612185 |
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| Protein GI | 99080031 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTCCT TCATAGGGCG GGTGCTTTCA AAGGTTCTTT TTTTCCGGGG CGGGTCAAGC
TATGGCGGCA GGATGATACT GGATGTTGTG ATTGAAGATG CGCGTTGGGA TGCGGCGGCG
CTCGAGAAAC AGGCACAAGA GGCCGTTTCG GCGACGCTGG CCTATCTTGA GCTTGAAGAT
GAGGATTGGG AAGTCACGGT CCTCGGCTGT GATGATGCGC GGATTGCGGA TCTCAATGCA
GAGTTTCGCG AAAAGCCAAA ACCGACGAAT GTGCTGAGCT GGCCTGCGCA GGAGTTGGCT
GCCGCCCAAG ACGGTGGTCA GCCCACTCCC CCGGAGGTCG ATTTTATGGG GGATGCGGCG
CTGGGCGATA TCGCGATTTC CTATGATACC TGCGTAAAAG AGGCCAATTT GGCGCATAAA
TCACGCGAGG ATCACGTGCG TCATCTGCTT GTTCACGGAA CATTGCATCT TTTGGGGTAC
GATCACATTC GTGACGGCGA CGCCACGATT ATGGAAACTT TGGAGGTGGG GATACTTGGC
AAACTGGGTA TTCCTGACCC ATATATCATA GAGGACGGGC CGTGA
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| Protein sequence | MGSFIGRVLS KVLFFRGGSS YGGRMILDVV IEDARWDAAA LEKQAQEAVS ATLAYLELED
EDWEVTVLGC DDARIADLNA EFREKPKPTN VLSWPAQELA AAQDGGQPTP PEVDFMGDAA
LGDIAISYDT CVKEANLAHK SREDHVRHLL VHGTLHLLGY DHIRDGDATI METLEVGILG
KLGIPDPYII EDGP
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