Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0185 |
Symbol | |
ID | 4078417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 203892 |
End bp | 205214 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005479 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_612180 |
Protein GI | 99080026 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGC CCAAGAAACT CTATATCAAG ACCTACGGCT GTCAGATGAA CGTCTATGAC AGCGAACGCA TGGCCGAGAC TTTGGGCGGG CAGGGGTATG TGGAGACACA GACGCCTGAT GATGCGGATA TGATCCTGCT CAATACATGC CACATCCGCG AGAAGGCTGC GGAAAAGGTC TATTCCGAAC TTGGGCGCTT CAAAGGGCTG AAGGCCGAAA AACCTGATCT CAAGATCGGC GTGGCGGGTT GCGTCGCCCA GGCCGAGGGT GAGGAAATCA TGCGCCGCCA GCCCCTGGTG GATCTCGTGG TCGGCCCGCA AAGCTACCAC CGTCTGCCGG AAATGGAGGC CAAGGCCGGC ACCGGGGAGA AGGTGCTCGA CACCGATTTC CCCGAGGAAG ACAAATTTGA AAAGCTGAAG CGCCGCCCCA AGGCCAAGCG TGGACCCACC GCGTTTTTGA CTGTGCAGGA AGGCTGCGAC AAATTCTGCG CCTTCTGTGT TGTGCCCTAT ACTCGCGGTG CAGAGGTGTC GCGTCCGGTG GATCGCGTGT TGCGCGAGGC AGAGGATCTG GTCGAGCGCG GCGTGCGCGA GATCACTTTG TTGGGCCAGA ACGTCAATGC CTATCACGGC GCTGGGCCCA ACGGAGACAT GACACTGGCC CAGTTGATCT GGGAGCTCGA CAAGATCGAC GGGTTGGAGC GGATCCGGTT TACCACCTCG CACCCCAATG ACATGATGGA CGATCTCATC GAGGCGCATG GCACGTGCAA GAAGCTGATG CCCTATCTGC ATCTGCCGGT GCAGGCCGGA TCAGACAAGA TCCTGAAACG GATGAACCGC AGCCACACCG CCGAAAGCTA TATTCGCCTG ATCGAGCGCA TCCGCGCGGC GCGTCCGGAC ATTTTGATCT CGGGCGATTT TATTGTCGGT TTCCCGGAAG AGACCGAAGA GGATTTCCAG GCCACGCTCG ATCTGGTGGA AGAAGTGAAA TACGGGACCG CCTATTCCTT CAAATATTCC ACCCGCCCGG GCACCCCTGC GGCGGAGCGT GCGCAAGTCG ATCCCAAAGA AGCGGATGAC CGGTTGCAGC GTCTGCAGGC CGTGCTGACG CGTCAGCAGA GGGAGGTGCA GGACAGCATG GTGGGACGCG AACTGGGCGT GTTGTTTGAA AAGGCCGGGC GCTTTGCGGG GCAGATGGTC GGCAAGTCTG ATTATCTGCA TGCCGTTCAT GTGGCCGATT GTGACGCCAA GATCGGTGAT CTGCGCCGCG TGCGGATCGT CTCTTCCGGG GCGAACTCGC TGGCAGGTGA ACTGATCGAC TGA
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Protein sequence | MSAPKKLYIK TYGCQMNVYD SERMAETLGG QGYVETQTPD DADMILLNTC HIREKAAEKV YSELGRFKGL KAEKPDLKIG VAGCVAQAEG EEIMRRQPLV DLVVGPQSYH RLPEMEAKAG TGEKVLDTDF PEEDKFEKLK RRPKAKRGPT AFLTVQEGCD KFCAFCVVPY TRGAEVSRPV DRVLREAEDL VERGVREITL LGQNVNAYHG AGPNGDMTLA QLIWELDKID GLERIRFTTS HPNDMMDDLI EAHGTCKKLM PYLHLPVQAG SDKILKRMNR SHTAESYIRL IERIRAARPD ILISGDFIVG FPEETEEDFQ ATLDLVEEVK YGTAYSFKYS TRPGTPAAER AQVDPKEADD RLQRLQAVLT RQQREVQDSM VGRELGVLFE KAGRFAGQMV GKSDYLHAVH VADCDAKIGD LRRVRIVSSG ANSLAGELID
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