| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0166 |
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| Symbol | |
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| ID | 4078774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 182088 |
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| End bp | 183914 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005460 |
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| Product | DNA polymerase III subunits gamma and tau |
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| Protein accession | YP_612161 |
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| Protein GI | 99080007 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC ACAGCCCCGA GATCTCTGAC GCAGTACAGA GCGGACAATA TCAGGTTCTG
GCACGCAAGT ACCGGCCCGA AACCTTTGCT GATCTCGTCG GGCAAGACGC TATGGTGCGC
ACGCTCAAGA ACGCCTTTGC CGCGGATCGC ATTGCGCAGG CCTTCATCAT GACGGGCATC
CGCGGCACGG GCAAAACCAC CACCGCGCGG ATCATTGCCA AGGGCATGAA CTGTATTGGC
GAGGATGGCC AAGGTGGCCC CACTACTGAG CCTTGCGGCA AGTGCGAGCA CTGCACCGCA
ATCATGGAAG GCCGCCACGT CGACGTGATG GAGATGGACG CCGCATCGCG CACCGGCGTG
GGCGACATTC GCGAGATCAT CGACAGCGTG GCCTATCGTG CGGCCTCGGC GCGCTACAAG
ATCTATATCA TCGACGAGGT TCACATGCTG TCGACCTCGG CCTTCAATGC GTTGCTGAAA
ACGCTGGAAG AGCCGCCCGC GCATGTGAAG TTCATTTTTG CCACCACCGA GATCCGCAAG
GTGCCTGTGA CGGTGCTCTC CCGCTGTCAA CGCTTTGATC TGCGCAGGAT CGAACCGGAG
GTGATGATCG ACCTCTTGCG CCGGATTGCG ACCAGCGAGC AGGCCGAGAT TGCCGACGAT
GCGCTGGCGC TCATTACCCG CGCGGCAGAA GGATCGGCCC GGGATGCGAC ATCCCTTTTG
GACCAGGCAA TCAGCCATGG TGCCGGAGAA ACCACGGCCG ATCAGGTCCG TGCAATGCTT
GGCCTTGCCG ATCGGGGCCG GGTGCTGGAT CTGATGGATA TGATCCTGCG CGGCGACGCC
GCTGCAGCAC TGACAGAATT GTCCGCACAA TACGCCGAAG GCGCCGATCC GATGGCTGTG
CTGCGCGATC TGGCCGAGAT CACCCACTGG GTTTCGGTGG TGAAGATCAC GCCGGATGCC
GCCGAGGACC CTACCATCAG CCCTGATGAG CGAGCCCGTG GACAGGATAT GGCGGCGCGC
CTGCCGATGC GAGTGCTGAC GCGGATGTGG CAGATGCTAC TCAAGGCGCT CGAAGAAGTC
GCCGCCGCCC CCAATGCGAT GATGGCGGCC GAAATGGCGG TAATCCGCCT GACCCATGTG
GCCGATCTGC CCTCGCCAGA AGAATTGCTG CGCAAACTGC AGGACACACC GCCGCCGCCA
CATCCAGGTG GGCCGGGCGG CGGACACCCC ATGCAGGGCA TGGGATCGCC TGCGGCGGGC
GGGGGAGGCG GGGCTCCGGC TTACGCCTCC GCCCCGCCGC AAGGCGCGCC CGGTGGGGAC
CCGCGCGGAG GCCATACGAT GTCGACTTCC GGCGGACAGA GCGCAGTTCT TGCACAGCGC
GCCGACAGCG CTCTCGCGCG CTATCCCAGC TTCGAACATG TGATCGAATT GATCCGCCAT
CACCGCGATG TCAAACTGCT GGTGGAGGTC GAAACAGGCG TGAGGCTCGT GTCTTATCAG
CCGGGTCGGA TCGAATTCAC CCCCGCCGCC AATGCCCCGC AGGATCTCGC GGCCCGGATC
GGCACTGCGC TCCAGAACTG GACCGGCAGC CGCTGGGTCG TCTCGATCGC CCCGGATGGC
GACGCGCCCA CGATCGCAGA GCTGCGCGAT GCGGCGCAGA ACGCTCTGCG GGCCGAAGCC
TCGGCACATC CGCTTGTTCA GGCGGTCCTT CAGAACTTTC CCAAGGCAAA GATCACCAAG
ATCCGCACCC AAGAGGAGTT GGCCGCCGAG GTTCAGGCCG AAGCCCTGCC CGAGGTCGAA
GACGAATGGG ACCCCTTCGA GGAGTGA
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| Protein sequence | MSEHSPEISD AVQSGQYQVL ARKYRPETFA DLVGQDAMVR TLKNAFAADR IAQAFIMTGI
RGTGKTTTAR IIAKGMNCIG EDGQGGPTTE PCGKCEHCTA IMEGRHVDVM EMDAASRTGV
GDIREIIDSV AYRAASARYK IYIIDEVHML STSAFNALLK TLEEPPAHVK FIFATTEIRK
VPVTVLSRCQ RFDLRRIEPE VMIDLLRRIA TSEQAEIADD ALALITRAAE GSARDATSLL
DQAISHGAGE TTADQVRAML GLADRGRVLD LMDMILRGDA AAALTELSAQ YAEGADPMAV
LRDLAEITHW VSVVKITPDA AEDPTISPDE RARGQDMAAR LPMRVLTRMW QMLLKALEEV
AAAPNAMMAA EMAVIRLTHV ADLPSPEELL RKLQDTPPPP HPGGPGGGHP MQGMGSPAAG
GGGGAPAYAS APPQGAPGGD PRGGHTMSTS GGQSAVLAQR ADSALARYPS FEHVIELIRH
HRDVKLLVEV ETGVRLVSYQ PGRIEFTPAA NAPQDLAARI GTALQNWTGS RWVVSIAPDG
DAPTIAELRD AAQNALRAEA SAHPLVQAVL QNFPKAKITK IRTQEELAAE VQAEALPEVE
DEWDPFEE
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