Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0163 |
Symbol | |
ID | 4078771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 179945 |
End bp | 180706 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638005457 |
Product | putative carboxyphosphonoenolpyruvate phosphonomutase protein |
Protein accession | YP_612158 |
Protein GI | 99080004 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.643607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCAGA TTGAAAAAGC CACGCGCTTT GCCGCGCTCC ACCAAAAAGG TGATCCAGTG GTGCTCTACA ACATCTGGGA TGCAGCAGGC GCAAAAGCAC TGGCTGAAAA CGGTGCGCCT GCGGTCGCGA CAGGAAGCTT GTCGATGGCG GCAGCACATG GCTACGCAGA CGGTGAGAGC ATACCCCTTG ATTTTGTCCT GCGCATCGTG GCGCGGATCT GTGAAACGGT TTCTGTCCCT GTCACGGTCG ATTTTGAAGG CGGCTATGCA ACCGCGCCTT CCGAAGTTGG CGAGAACGTT CGCAAGGTCC TGCGTGCGGG CGCCGTCGGG ATCAATTTCG AAGACCGCGT TGTGGGCGGC TCGGGATTGC ATCCGGTTTC CGTACAGGTC GACCGCATTC ACGCCATCAA AACGGTCGCG GCAGAAGAAG GCGTGCCGCT GTTTATCAAC GCCCGGACCG ATCTGTTCCT TGGACGCGAC CCCGAGACGC ATCGAGACCA GCTGCCAGAG GCGCTCGAGC GAGCAGCCGC CTATTCAGAG GCCGGAGCCT GCGGTTTCTT TGTGCCGGGG CTTACAGAGC TCGACCTCAT CGCGCACTGT GTGGAGCATA CGCACCTGCC GGTAAACGTA ATGATGCGTG GGCAGGCCCA GTCCCTCAAA GAAATTGCGG CTTTGAATGT CGCGCGGGTC AGTTACGGTC CGGGACCGTT CTTCAAGTTC CTGACCGACC TCAAAGCTGC GGAGGCCAGA CTGCGCGCCT AG
|
Protein sequence | MSQIEKATRF AALHQKGDPV VLYNIWDAAG AKALAENGAP AVATGSLSMA AAHGYADGES IPLDFVLRIV ARICETVSVP VTVDFEGGYA TAPSEVGENV RKVLRAGAVG INFEDRVVGG SGLHPVSVQV DRIHAIKTVA AEEGVPLFIN ARTDLFLGRD PETHRDQLPE ALERAAAYSE AGACGFFVPG LTELDLIAHC VEHTHLPVNV MMRGQAQSLK EIAALNVARV SYGPGPFFKF LTDLKAAEAR LRA
|
| |