| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0158 |
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| Symbol | |
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| ID | 4078825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 173475 |
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| End bp | 174506 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005452 |
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| Product | permease |
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| Protein accession | YP_612153 |
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| Protein GI | 99079999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATA CTTCTCTTTC CCTGCGGCCG ATGCGGGCCG CTCTTGAAGG GATGCAGAGT
CCGTGGACCC TCGGCGCGCT TATTCTGGCT GTTGTCGCTT TGGTGGATGG CGCAAATTTC
TGGCCGGTTC TGAGTTTTGC AGCGCAGGCC TTGTTGTCGA CATCCAAGTA CATCCTTTTT
GCGGTGACTC TCTTGGCCTA TCTCAAGGCC ACTGGCGCAG AGGCGATGGT GGCGCGGGCC
TTTGTGGGGC GCGAGACACG GATGATCTTC CTTGCAGCGC TTCTTGGGGG GCTTGCTCCG
TTCTGTTCTT GCGAGGTGAT CCCATTCATC GCCGGGCTAT TGGCGCTGGG CGCGCCGCTT
TCGGCAGTGA TGGCGTTCTG GTTGTCGTCG CCGCTGATCG ACCCGCCGAC ATTGTTGATC
ACTGCGGCGG CGCTTGGCTG GCCCTTTGCG CTGGCAAAGG CGGTGAGCGC GGTGGCGCTT
GGTCTATTTG GCGGTTTTGT CGTCAAGGCA TTGCGCCGTG GCGGGCTTTT TGCGGAGCCT
CTGAAACGAG CTCCTGTCAA AAGCTGCTGC GGATGCGCAG CGCCTGCCAC CGATGCACGG
CCCAATTGGC GTTTCTGGCA AGACGCAGAG CGCCGCGAGA TATTCCGCGG TCAGTTTGTG
GAGAACGCTC TGTTCCTGTT GAAGTGGCTT GCGTTTGCCT ATGTGCTTGA GGCGCTTCTG
GTGACCTATG TGCGTCCAGA GTGGATTGCC GCGATCGTGG GAGGAGAAGG CGTTGTCCCG
ATTGCAATCG CTGCGGTGGT TGGAATGCCC GCCTATCTCA ACTCCTATGT GGCGCCGCCA
TTGTTGGCTG GATTGATGAG CCAGGGGATG AGCGCGGGTG CGGCGCTTGC CTTTATGATC
GCTGGTGCCG TGAGCTCGAT CCCGGCAATG GCGGCGGTGT GGTCGCTGGT GAAGCCGCGG
GTCTTTGCCA CCTATCTCGG GCTTGGTGTT TCGGGGGCGA TCCTGTCGGG CGTCGTCTTC
CAGATGATCT GA
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| Protein sequence | MADTSLSLRP MRAALEGMQS PWTLGALILA VVALVDGANF WPVLSFAAQA LLSTSKYILF
AVTLLAYLKA TGAEAMVARA FVGRETRMIF LAALLGGLAP FCSCEVIPFI AGLLALGAPL
SAVMAFWLSS PLIDPPTLLI TAAALGWPFA LAKAVSAVAL GLFGGFVVKA LRRGGLFAEP
LKRAPVKSCC GCAAPATDAR PNWRFWQDAE RREIFRGQFV ENALFLLKWL AFAYVLEALL
VTYVRPEWIA AIVGGEGVVP IAIAAVVGMP AYLNSYVAPP LLAGLMSQGM SAGAALAFMI
AGAVSSIPAM AAVWSLVKPR VFATYLGLGV SGAILSGVVF QMI
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