| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0152 |
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| Symbol | |
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| ID | 4078819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 167083 |
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| End bp | 167544 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005446 |
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| Product | alkylhydroperoxidase AhpD core |
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| Protein accession | YP_612147 |
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| Protein GI | 99079993 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAAC GTCTCGACCA ATTCGCCGCC GCTGGCGATC TCTTCAAGCC GATGATGCAG
CAAGAAGAGC TGCTGAAGAC CTCGGGCCTC GAGTTCAGCC TGATCGAGCT GGTGAAACTG
CGCGCCTCGC AAATCAACGC GTGCGCGTTC TGCATCCACA TGCACACCCA TGACGCGCGC
AACGCGGGTG AGAGCGAGGA CCGGATGCAT CTGTTGCCTG CATGGCGTGA AAGCACGCTC
TATACCCCTC GCGAACGCGC AGCCTTGGCC TGGACCGAGG CACTAACTCT GGTTGCCGAT
ACGGCCGCCC CTGACGCCGA CTATGAACTG GTCGCCAAGG CGTTCAGCCC CCGCGAGCAG
GTCGCACTGA CGCTCTTGAT TGGGGCGATC AATGCCTGGA ACCGCATTGC AATTGGTTTT
CGCACCCCCC ACCCTGCCGC CAAGGAGGCC TCTGCTGCGT GA
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| Protein sequence | MTQRLDQFAA AGDLFKPMMQ QEELLKTSGL EFSLIELVKL RASQINACAF CIHMHTHDAR
NAGESEDRMH LLPAWRESTL YTPRERAALA WTEALTLVAD TAAPDADYEL VAKAFSPREQ
VALTLLIGAI NAWNRIAIGF RTPHPAAKEA SAA
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